Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1758 ATGGTGTTGAGGAAAGTGGGTAAGTATGAGATTGGAAGAACCGTTGGAGAGGGAACCTTTGCGAAGGTAAAGTTTGCTCAGAACACAGAAACTGGCGAGAGTGTTGCCATGAAGGTGCTCGACCGTAGCACCATCATCAAGCACAAAATGGTTGACCAGATCAAGAGGGAAATTTCTATCATGAAGCTAGTCAGACATCCATATGTTGTTCTAGCCAGCCGTACTAAGATTTATATCATATTGGAGTTTATTACAGGTGGTGAATTGTTTGATAAAATTGTAAGCCATGGGCGTCTTAGTGAAGCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTTTTGCCACAGTAAAGGAGTTTATCATAGAGATTTAAAGCCTGAAAATCTTTTACTTGATTCACAAGGAAATATTAAGATTTCGGATTTTGGTTTGAGTGCATTTCCAGAACAGGGGGTCAGTTTGCTTCGGACAACTTGTGGAACTCCTAATTATGTAGCTCCTGAGGTACTCAGTCACAAGGGTTATAATGGTCCTCCAGCAGATGTTTGGTCCTGTGGAGTTATCCTCTACGTTCTATTGGCTGGATATCTTCCCTTTGACGAACTTGATCTAACTACGTTGTACAGTGTCAAATGGCTCAGGAAACATTGCTCTATTGAGAAAGCACAGTTTTCATGCCCTCCTTGGTTTCCTGTGGGAGCAAAGTCTTTAATACACAGAATGTTGGACCCAAATCCTGAACATCGCATAACCGTTGAGCAGATAAGGAATGATGAGTGGTTTCAAAAGGGACATGTTGAAGTCAGTCTCATCGAGTATGAAGATGTAAATCTGGATGATGTAAATGCTGCATTTGACAATGATGAGGAAGCTTGCTTTTCCATGATGCATTCATATGAAATGTATCTTCCCAGTTTTGTTGACATATTGAATGTTTTGTCACTGAAGGATCAGAGGGCTAATCAGCAATGTGAGAATGACGATGTGGGTCCTCTAACTCTTAATGCATTTGACATGATAATTTTATCTCAAGGCTTAAACCTTGCAACCATATTTGATCGTGGACAGGACTCCATGAAATATGAAACACGCTTCATCAGTCAAAAGCCACCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACGCATATTCGCAACTATAAGATGAGAATAGAGGGTATTTCGGCAAATAAGGCTTCTTATTTCTCAGTTATACTAGAAGTCTTTGAAATCGCTCCCACATTCTTCATGGTGGACATTCAGAAAGCAGCTGGAGATGCTGGTGAATATCTCAAGTTTTACAAGAATTTTTCTAGCAATCTTGAAGATATCATGTGGAAACCGCCCCATGAAACAAGCAAATTAAGGAACTCCAAGATGAAATGCAAAGGGCAGTGA 1431 0.4011 MVLRKVGKYEIGRTVGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVLASRTKIYIILEFITGGELFDKIVSHGRLSEAESRRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSAFPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGPPADVWSCGVILYVLLAGYLPFDELDLTTLYSVKWLRKHCSIEKAQFSCPPWFPVGAKSLIHRMLDPNPEHRITVEQIRNDEWFQKGHVEVSLIEYEDVNLDDVNAAFDNDEEACFSMMHSYEMYLPSFVDILNVLSLKDQRANQQCENDDVGPLTLNAFDMIILSQGLNLATIFDRGQDSMKYETRFISQKPPKVVLSSMEVVAQSMGFKTHIRNYKMRIEGISANKASYFSVILEVFEIAPTFFMVDIQKAAGDAGEYLKFYKNFSSNLEDIMWKPPHETSKLRNSKMKCKGQ 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1758 476 Pfam Protein kinase domain 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1758 476 PANTHER - 2 473 - -
Aed3g1758 476 Gene3D Transferase(Phosphotransferase) domain 1 3 332 - -
Aed3g1758 476 ProSiteProfiles NAF domain profile. 333 357 IPR018451 GO:0007165
Aed3g1758 476 CDD CIPK_C 339 454 - -
Aed3g1758 476 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 473 - -
Aed3g1758 476 SUPERFAMILY Protein kinase-like (PK-like) 6 266 IPR011009 -
Aed3g1758 476 Gene3D Kinase associated domain 1, KA1 333 458 - -
Aed3g1758 476 ProSiteProfiles Protein kinase domain profile. 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1758 476 Pfam NAF domain 335 393 IPR004041 GO:0007165
Aed3g1758 476 SMART serkin_6 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1758 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Aed3g1758 476 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1758 Aed-Chr3 22175210 22181099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1758 1 418 CBL-interacting serine-threonine protein kinases AT4G24400 73.050 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed3g1758 Pkinase 1.6e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1758 3 22175210 22181099 Aed3g1758 3 22175210 22181099 ECH