Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1753 ATGATGGGGGAAGAACTTTCAGGCTTGACAGTCAAAGAATTACAAAATGTGGAGAACCAATTAGAAATTAGCCTTCGTGGTGTTCGAATGAAAAAGGATGACCTTTTAATGGATGAAATACAGGAGCTAAATCGAAAGGGAAACCTCATACATCAAGAAAATGTGGAACTGTATAAGAAGGTTTATGGAACAAAAGAGGATAACGAAACAATCAGAGATTCTGTTCTCACAAATGGTCTAAGCATAGGAGAGGATTTGCAAGTACCTGTGAATCTCCAGCTAAGCCAGCCACAGCAACACTACAAGGCACCTTCAGGAACTACAGAATTGGGGTATGAGCTTTAG 345 0.4 MMGEELSGLTVKELQNVENQLEISLRGVRMKKDDLLMDEIQELNRKGNLIHQENVELYKKVYGTKEDNETIRDSVLTNGLSIGEDLQVPVNLQLSQPQQHYKAPSGTTELGYEL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1753 114 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 112 - -
Aed3g1753 114 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 112 - -
Aed3g1753 114 Pfam K-box region 1 61 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed3g1753 114 ProSiteProfiles K-box domain profile. 1 67 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1753 Aed-Chr3 22130802 22131458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1753 1 112 MADS-box Gene Family AT3G57230 50.794 1.38e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1753 K09264 - gmx:100778970 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1753 3 22130802 22131458 Aed3g1753 3 22130802 22131458 ECH