Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1739 ATGCCTCACAGGGCGACTTACTTTTTCCCGAGGCAGTTTCCGGAAAGAAAGTTGGATGAATCTTTGAAGCAGAGATTGGATCACGAGAAGAGGAAAATCGTCAACTCCATCAAATCATCGGATACGACTTTTGCGTATGAAAGCGACGCGTCGAAAAAGCAGACACAGACTCACACTCCCACACACCCAGCCAAAGACGACATCGACGACGTCGTTTTCTCGTCCACTAAGCAAAACGCGGTCTCCGATTTGTTCACCGGCGGCGACAAGTTCCGAACCAAGCAGAAGCAAATTGCCGCCTTCTGCGATTGGTTGATCGATAAAAAGAAGGATCGGAACCGACCGAGTCATCGTCACCACCATTTCAAATCCTATCCGAACGAGGAGGATGAGGAGGAGGAAGAGGATGAACGCGAGCATCTGCTTCCGCCGCCGCCGCCGTCGCAGGCGGTGAAGGATGCCGTCGACCGGAGCTTCGACCGGCAGGTTTCGCTGCCGCGGCTGTCCAGCGGGAGCAGCTACGCCGGAAGCTTGTTCACTTTGGACGGCACCGCCACATTCTCCAGCGACGTCACCAAAGACGACACGTCGTCGTTTCATCATGTCTTCGCCGAAGAAGATGCGACAACGAAAAAACAGCAAGAAGAAGAAGAGAGAGAAAAACGCAACACCGCGCAGAAGTACAAAGAGAGCTACTACCTGCAACTTGCATTCACGAAGCGGCTATCTTGCTTAGCAAGCCTCGGCTCCGAACCTGTTCTCACTCTCGACGCCGGCCCCGAAACCTGGGATGCTGAGTCCGTTTCGTATCGTCTATGGGTGAGTGGGTGTTTGTCGTATACGGATAAGATTTCTGACGGTTTTTACAACATACTGGGGATGAATCCTTACCTGTGGGTGATGTGCAACGATGTGGAGGAAGAAGGGAAGCGGTTACCGACTCTGATGGCGCTTAAGGCGGTTGAGCCCAGCGAGACTTCCATAGAGGTGGTTCTGTTTGATAGACACGAGGATTATCGGCTTAAGGAGCTTCAAGATAAAGCTCAGGAGTTGTATTCTGCTTCGGAGAACGCGTTGGTGCTTGTGGAGAAGCTCGGAAAACTCGTTGCCATATGCATGGGGGGTACGTTTCCGGTGGAGCAAGGAGATCTACACATGCGGTGGAAGTTGGTGAGTAAGAGGTTGAGGAACTTTCACCAATGTGTTGTGCTTCCCGTGGGTAGCTTATCTAGTGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCGGATTACATAGGTTTGCCATGTCGTATTGCTCGAGGTTGTAGGTATTGTGCTTCAGATCATAGATCGTCTTGCCTTGTCAAGATTGAGGATGACAGACAGCTCTCAAGGGAATATGTAGTTGATCTGGTTGGGGAACCAGGAAATATCCATGGGCCAGATTCCTCTATTAATGGAGCATATGTGTCTTCAATACCTTCTCCATTTCAAATTTCTCATTTGAAAGAATCCCAATCGCCATATGTGGACGTTGCAGAATGTTCTCAATCTCTTGAGATCATTCCTATTCTGAAGTTTGACTTGGTTGTTACTGAATATGTTACAGGCCGTGTACACGAAGATCAGCAAGCTGAAGAAACTGATCTGCATAAAAATAATAATGGCTCTATTTATCCTGCAATAGATCAAATTCGTGGAGGTACAGAACCGCCTCTAATTCCTTTTGGCTTGAAAGGGAATGACAAGGAGTGTGCGATTCTAGGTTTATTAAATTTTCCTCCCGTATATGAAGGTGTTTCTGAAGATCTTCACCCAGCCTCTGAAGCACCATTACATGAATACCCCAGGCTCAGTAAAGATTCCGTTGTAGTACTAGAAGCTTCCAACAAAGAGATAGAGGTCATTGTAAAAGGAAGTTCTGGGGTAAAAAGTAACTACAAGCAATCTACACTGAGCTCATCCAGCGGATCAGGACAGGAACAAGTAAAAAATAAAGTTGAAAATCAGGGTGCTGGTAATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGATTGGCTTGAGATACCATGGGATGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTGTATCGTGCTGAATGGCATGGATCAGTTGCAATAATGAAACGAGTACGTCATCCAAATGTGGTGTTATTCATGGGTGCAGTTACTAAACGTCCCCATTTATCTATAGTAACAGAATATTTGCCTAGGTTTGAGTGTCTCATTGATGTTTCCTGGTGCATTTTTTATGATAGAGGCAGTTTATTTCGCCTAATACATAAGCCAGCATCTGGTGAAATTCTAGATCCAAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGTCTAAAGCCTCCAATTGTGCACTGGGATCTCAAAACTCCAAACCTGTTGGTGGACAGAAATTGGACTGTAAAGGTCTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCTTATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGAGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGGGTTATCCTGTGGGAACTTGTGACTCTGCAACAACCGTGGAATGGACTGAGTCATGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGAATAGGAGACTTGCTATCCCTTCAAACATCTCCCCAGCGTTGGCCTCCCTCATGGAATCTTGTTGGGCCGATAAACCTGCTGATCGGCCATCTTTTGGTAGCATAGTTGAGTCACTGAAGAAGCTACTGAAGTCACCAGCGGATGCAATAAAAATGGGTGGGAAGTAA 2868 0.4665 MPHRATYFFPRQFPERKLDESLKQRLDHEKRKIVNSIKSSDTTFAYESDASKKQTQTHTPTHPAKDDIDDVVFSSTKQNAVSDLFTGGDKFRTKQKQIAAFCDWLIDKKKDRNRPSHRHHHFKSYPNEEDEEEEEDEREHLLPPPPPSQAVKDAVDRSFDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDVTKDDTSSFHHVFAEEDATTKKQQEEEEREKRNTAQKYKESYYLQLAFTKRLSCLASLGSEPVLTLDAGPETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSETSIEVVLFDRHEDYRLKELQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHMRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHRSSCLVKIEDDRQLSREYVVDLVGEPGNIHGPDSSINGAYVSSIPSPFQISHLKESQSPYVDVAECSQSLEIIPILKFDLVVTEYVTGRVHEDQQAEETDLHKNNNGSIYPAIDQIRGGTEPPLIPFGLKGNDKECAILGLLNFPPVYEGVSEDLHPASEAPLHEYPRLSKDSVVVLEASNKEIEVIVKGSSGVKSNYKQSTLSSSSGSGQEQVKNKVENQGAGNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRFECLIDVSWCIFYDRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRLAIPSNISPALASLMESCWADKPADRPSFGSIVESLKKLLKSPADAIKMGGK 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1739 955 MobiDBLite consensus disorder prediction 204 224 - -
Aed3g1739 955 ProSitePatterns Protein kinases ATP-binding region signature. 699 720 IPR017441 GO:0005524
Aed3g1739 955 SMART serkin_6 693 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1739 955 Coils Coil 211 231 - -
Aed3g1739 955 Pfam Ethylene-responsive protein kinase Le-CTR1 265 474 - -
Aed3g1739 955 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 144 715 - -
Aed3g1739 955 MobiDBLite consensus disorder prediction 38 58 - -
Aed3g1739 955 SUPERFAMILY Protein kinase-like (PK-like) 672 938 IPR011009 -
Aed3g1739 955 Pfam Protein tyrosine and serine/threonine kinase 716 939 IPR001245 GO:0004672|GO:0006468
Aed3g1739 955 MobiDBLite consensus disorder prediction 112 157 - -
Aed3g1739 955 CDD STKc_MAP3K-like 699 939 - -
Aed3g1739 955 Gene3D Phosphorylase Kinase; domain 1 680 717 - -
Aed3g1739 955 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 144 715 - -
Aed3g1739 955 MobiDBLite consensus disorder prediction 38 69 - -
Aed3g1739 955 ProSiteProfiles Protein kinase domain profile. 626 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1739 955 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 716 954 - -
Aed3g1739 955 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 716 954 - -
Aed3g1739 955 MobiDBLite consensus disorder prediction 641 663 - -
Aed3g1739 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Aed3g1739 955 Gene3D Phosphorylase Kinase; domain 1 718 747 - -
Aed3g1739 955 Gene3D Transferase(Phosphotransferase) domain 1 764 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1739 Aed-Chr3 21999469 22006291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1739 1 954 MAP Kinase Kinase Kinase AT4G24480 52.024 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aed3g1739 PK_Tyr_Ser-Thr 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1739 - - gmx:100786546 1630.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1739 3 21999469 22006291 Aed3g1739 3 21999469 22006291 ECH
Aed3g1739 3 21999469 22006291 Aed10g0154 10 1162109 1163149 PCT