Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1737 ATGAGCGAAGAAGAGAACAAGGGTTGTGCTTTTCTGGGAACCAACTCCACCTATTCAGTGGATGAAATTGTATTAGTGGTTACTGTGAATGAGAATTCAGTTTTAACAGGTTTTCTTCTTGATCCTGCGAAATGTGGTATGCTGAGTTTGCCAGACAAACAAAGACTAGTCCATGAGATTGCTCAACAGTCAAAAGATGCCTCGAGTATGCTTCAGTCATTTACACGTAGGGAACTCCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATAACAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCCAACTTGCACATCAATGGAAATGCACCTGCTCAATCTCCTGCCAAAAGTTGCATTGGATCTAAAAGGAAAAAGAAACATGCATCTCAGGAGTTACATCATGCTCCTCTAGGGAACAGTAAGGAGGAGACAGTGAAAACCTTTTTGTGTCAAAATGTTGCGTGCAAAGCTACATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGTATATGTCATCATTATGATGATAACAAGGATCCCAGTTTGTGGTTGACCTGCTGCTCCGATCTTCCCAATGATGAGGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGGCTGGCATTTTGAAGGGTAGTTGTGGTATTAAGTTGGATGGAACCTTCTGTTGTGTTTCTTGTGGAAAAATTAATGAGCTAATGAAGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAACGGATATACTCTCTTTGCGAATATCTCTAGCCCACAGAATCCTCGTAGGAACAGAAGTCTACAAGGAAGTGCAGAAAATTGTTGAAACTGCTCTTAAGTTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCTAGTATGACGCGTGGAATTGTGAGCAGGCTTTCATGTGGTGCTGAGGTTCAGAGATTGTGCTCCACCGCACTTGAATGTTTTGATTCAAAGTTTTCTGGCCTTTTCTCTATTTTTGTGGAAAAGAAAAATGCACCAACATGTTCAATTCGTTTCGAAGAGTGTCTTCCTACTTCAGTGGTTATTGTGCTAGAGTACAAAGAGAAACTCTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACCGAGTATCGACAATGGACTACCCTGAACAACCTACTTTCATTGTCTTGAGGCCAGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAATTCTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGCGCTGCAGAAGCTAAATGGGTGACACCATGTGAAGAACCACCCACCAATCCTTCAAAAGTTATCAGTTGCAGTGGGAATCGCTTTCGATGGTCCCCTCAAAGATCCTCAGGTACAGGAGTGGACATGTGTGCACAGGACCAAACAACAACTGCTGAAATTCATCCCATGGAATTGGCCAACTCTGACATGAAGTTGTTATCATCCGGAGAACAGCCCAGGAAGAAACACATCATTTTGAACATCAGGAGCAGGTTTGAGGAGTTCCTCTCCAAGCCTCAACAACCACTAGAGCCTTTTCCATACAAAAATCTCGCCACTGCAGTTTCACCTTCCACGCCTTCTAAGTCCTATGAAATGAGGCAAATTCCCAGCTTGAATTCCAGAAAGCGCTCAAAGGAGAACGATTACGAGTACTCCGTGAGGGTGGTCAAATGGCTTGAGCATCAAGGGCACATAGATGAAATCTTCAGAGTAAGGTTTCTGACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTGAGTGCTTTTGTTGATGCATTGATTGATGACCCGGCAAGCTTAGCAGACCAGATCATACACACTTTCAGTGACGAGATATGTTGTGAGCAAAAATCTTAG 1956 0.4243 MSEEENKGCAFLGTNSTYSVDEIVLVVTVNENSVLTGFLLDPAKCGMLSLPDKQRLVHEIAQQSKDASSMLQSFTRRELLEIICAELGKERKYTGYNKSQMIEHLLKIISKNSNLHINGNAPAQSPAKSCIGSKRKKKHASQELHHAPLGNSKEETVKTFLCQNVACKATLNPEDSFCKRCSCCICHHYDDNKDPSLWLTCCSDLPNDEESCGMSCHLQCALSNQMAGILKGSCGIKLDGTFCCVSCGKINELMKTWRKQLLVAKEARRTDILSLRISLAHRILVGTEVYKEVQKIVETALKLLENEVGSLDHVYASMTRGIVSRLSCGAEVQRLCSTALECFDSKFSGLFSIFVEKKNAPTCSIRFEECLPTSVVIVLEYKEKLLKNFLGCRLWHRVSTMDYPEQPTFIVLRPEKRFKLENLHPSTEFFCKASLFSSTGILGAAEAKWVTPCEEPPTNPSKVISCSGNRFRWSPQRSSGTGVDMCAQDQTTTAEIHPMELANSDMKLLSSGEQPRKKHIILNIRSRFEEFLSKPQQPLEPFPYKNLATAVSPSTPSKSYEMRQIPSLNSRKRSKENDYEYSVRVVKWLEHQGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQIIHTFSDEICCEQKS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1737 651 MobiDBLite consensus disorder prediction 552 567 - -
Aed3g1737 651 CDD PHD_VIN3_plant 182 247 - -
Aed3g1737 651 Pfam PHD - plant homeodomain finger protein 162 282 IPR032881 -
Aed3g1737 651 MobiDBLite consensus disorder prediction 552 571 - -
Aed3g1737 651 PANTHER VIN3-LIKE PROTEIN 2-RELATED 31 651 IPR044514 GO:0010048|GO:0040029
Aed3g1737 651 PANTHER OS08G0220600 PROTEIN 31 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1737 Aed-Chr3 21984964 21990034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1737 40 645 PHD Gene Family AT5G57380 33.548 2.41e-101 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1737 - - gmx:100785502 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1737 3 21984964 21990034 Aed3g1737 3 21984964 21990034 ECH