Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1727 ATGCACAGCACCACGCGCGCCGAAGCGGAGCGTCTCCTCGGGATCGCGGAGAAGCTCCTCCAGAGCCGCGATCTGATTGGTTCGCGCGAGTTCGCGATCCTTGCTCAGGAGACAGAGCCTCTTTTGGAAGGCTCCGATCAGATCCTCGCCATCGTCGATGTACTCCTCGCCGCCGACAAGCGCGTGAACAACCACCCCGACTGGTACGCCGTCCTCCAGGTCGACCGCCGCTCCGACGACCTCGACCTCATCAAAAAACAGTACCGCCGCCTCGCCCTCCTCCTCCACCCCGACAAGTCCCGCTTCAACTTCGCCGACCACGCCTTCAAGCTCGTTGCCGACGCCTGGGCCCTACTCTCCGATCCCATAAAAAAATCAGTCTACGATAAGGAGCTTTCTTTTTTCTCCCGCGTCGATTTATCCGTTCCTGGATGGGTCCAGCAGGAGAAGCTTCCAGTCCGGAGGACTGGGCCCGGGCCCGGCGGGCCTAGCTCCCGCCACAGCGCTGCGGCAGCCCGCGATGACATTCACGTGGACGAGAATTCAAATTCGAATTCGAATTCGAGGAGGAGAAGCTCCACTTTCTGGACCGCGTGTCCCTATTGTTACCGTTTGTATGAGTATCCTAGGGTTTACGAGGGTTGCTGCTTGCGGTGCCAGAATTGTGATAGATCCTTTCACGGCGTCACGGTTCCGTCGCTTCCGCCGCTTGTTCCGGGCCAGGAGGCTTATTATTGCTGCTGGGGATTCTTCCCCATGGGGTTTGTTGGTGGAAGCTTCGGTTCGCCGGAGAAAGAGGCTCCAGCAGTGCCGGTGCAACCGACACCACCGGCACAACCGGCTTCCTCGCTGCCGAATTGGATGCCGGTGCCGCCGGAGAATGGCGTGGGGACTGCACAGGTGACGCCGGGGGCGGCGGCGAGGCTGACGAGGTCGGGGGCGGCGGTGACGAACGGGACTGGGCCGAAGAAACGGGGTAGGCCGAGGAAGTACCCATTGCAATCGTGA 1008 0.6111 MHSTTRAEAERLLGIAEKLLQSRDLIGSREFAILAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDDLDLIKKQYRRLALLLHPDKSRFNFADHAFKLVADAWALLSDPIKKSVYDKELSFFSRVDLSVPGWVQQEKLPVRRTGPGPGGPSSRHSAAAARDDIHVDENSNSNSNSRRRSSTFWTACPYCYRLYEYPRVYEGCCLRCQNCDRSFHGVTVPSLPPLVPGQEAYYCCWGFFPMGFVGGSFGSPEKEAPAVPVQPTPPAQPASSLPNWMPVPPENGVGTAQVTPGAAARLTRSGAAVTNGTGPKKRGRPRKYPLQS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1727 335 PRINTS DnaJ domain signature 69 87 IPR001623 -
Aed3g1727 335 PRINTS DnaJ domain signature 88 103 IPR001623 -
Aed3g1727 335 PRINTS DnaJ domain signature 104 124 IPR001623 -
Aed3g1727 335 Gene3D DnaJ domain 56 139 IPR036869 -
Aed3g1727 335 MobiDBLite consensus disorder prediction 151 191 - -
Aed3g1727 335 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Aed3g1727 335 MobiDBLite consensus disorder prediction 269 287 - -
Aed3g1727 335 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 300 - -
Aed3g1727 335 MobiDBLite consensus disorder prediction 264 335 - -
Aed3g1727 335 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Aed3g1727 335 CDD DnaJ 67 121 IPR001623 -
Aed3g1727 335 Pfam DnaJ domain 67 129 IPR001623 -
Aed3g1727 335 SMART dnaj_3 66 124 IPR001623 -
Aed3g1727 335 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Aed3g1727 335 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1727 Aed-Chr3 21900926 21901933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1727 5 333 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 49.432 2.23e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1727 - - gmx:100816918 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1727 3 21900926 21901933 Aed3g1727 3 21900926 21901933 ECH
Aed3g1727 3 21900926 21901933 Aed10g0135 10 1029414 1030142 PCT