Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1726 ATGCTATCTGAATTGAATATGAGGCTATTTTGCATGGTTGGAGGGCAGAGTGGTAAATTCAACCTGCGTGTTGTTTTGCAGTCAGATAAGGCGTCGTTGCTGGGGGAAGTGGTTGAGCACGTGAAGCGGCTGAGGAAGGAGGCCGATGACGTGGCGTGTGGGGACTCGTCGTCGTCGTCCTCGTGCGCGTGGCCATTTCCGGGGGAGTGCGACGAGGCGACGGTGAGTTACTGCGACGGCGGCGGGGAGCCACGGCGGGTGAAGGCGACGCTGTGCTGTGAGGACCGGGCCGGTCTGAACCGTGACGTGGCGCAGGCGATCCGGTCGGTTCGGGCAAAACCGGTACGGGCGGAGATGATGACGGTTGGGGGAAGGACGAAGAGTGTGGTGGTGGTGGAGTGGCCACCACGTGAGGGGAAGGAAGAGGAGGTTGGGGCGCTGGAACGGGCTTTGAAAGCTGTGGTAGATAATCGGGCCTTGGTGGGCTTTGGAATGGGCCCGCTTGTTGTGGGCCAGAAACGGGGTAGGGATTGTTGTGGTTCGCCTAGTAGTGAGGCCGACTCTGACTTCTTGCTCAGGAATGGGAACTTCGGCTAA 597 0.5997 MLSELNMRLFCMVGGQSGKFNLRVVLQSDKASLLGEVVEHVKRLRKEADDVACGDSSSSSSCAWPFPGECDEATVSYCDGGGEPRRVKATLCCEDRAGLNRDVAQAIRSVRAKPVRAEMMTVGGRTKSVVVVEWPPREGKEEEVGALERALKAVVDNRALVGFGMGPLVVGQKRGRDCCGSPSSEADSDFLLRNGNFG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1726 198 PANTHER TRANSCRIPTION FACTOR BHLH30 27 176 IPR045847 GO:0003700|GO:0006355
Aed3g1726 198 Coils Coil 137 157 - -
Aed3g1726 198 PANTHER OS09G0463900 PROTEIN 27 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1726 Aed-Chr3 21889264 21889860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1726 22 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 39.041 3.43e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1726 - - gmx:100816394 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1726 3 21889264 21889860 Aed3g1726 3 21889264 21889860 ECH