Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1723 ATGTTCTCAAAGCTTCACCCACAGCATCATCAGCATCAGCAACAGCAGCATCAACCTTTTCAATTCTCTAGGGAATGTCAAACTTCCGAGGACGATGACAGCCCAAGCAGCGCTGGCCCCAACGCCGCGCACGTCGCCGCCCAAAGACTAGCTTTGGGCGATGGGGCCACAATTGAAGTGGTGAGGCGGCCCAGGGGCCGCCCGCCTGGGTCCAAGAACAAGCCCAAGCCGCCTCTCATAATAACGCGGGAGCCCGAGCCTGTCATGAGCCCATTCATTCTAGAAATCCCGAGCGGGACCGACGTCGTCGAGGCCCTAGCACGTTTCAGCCGCAGAAAGAACACTGGACTCTGCGTGTTAACCGGTTCCGGAACTGTCGCCAACGTCACTCTCCGTCAACCGTCTTTCACTCCCGCCGGCGCCGCCACCGTCACGTTCCACGGCCGCTTCGATATTCTCTCCGTGTCCGCCACCATCGTCCTCCACACCTCGCCGTCGTTGATCCCACCCAGCTCCTTCGCCGTGTCCCTCGCCGGACCGCAGGGGCAGATCGTCGGCGGACTCGTCGCCGGGAGGCTCCTCGCCGCAGGGACGGTGTTCTTGATCGCCGCATCGTTCAACAATCCGTCGTATCATCGGCTGTCTTCGGAGGAGGACGTGCAAAACAACTCCGGCGGTGGAGGCGAGACGCAGTCGTCGCCTCCGGTGTCCGGTGGCGGCGGCGCGGAGAGCGGTCACGTTCCGGCTGAGTCGTGTATGTATAGCTGTCAGCTTCCTTCGGATGTGATTTGGGCTCCAACCCCTAGACCACCTTTCTGA 819 0.6142 MFSKLHPQHHQHQQQQHQPFQFSRECQTSEDDDSPSSAGPNAAHVAAQRLALGDGATIEVVRRPRGRPPGSKNKPKPPLIITREPEPVMSPFILEIPSGTDVVEALARFSRRKNTGLCVLTGSGTVANVTLRQPSFTPAGAATVTFHGRFDILSVSATIVLHTSPSLIPPSSFAVSLAGPQGQIVGGLVAGRLLAAGTVFLIAASFNNPSYHRLSSEEDVQNNSGGGGETQSSPPVSGGGGAESGHVPAESCMYSCQLPSDVIWAPTPRPPF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1723 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 218 - -
Aed3g1723 272 MobiDBLite consensus disorder prediction 1 83 - -
Aed3g1723 272 ProSiteProfiles PPC domain profile profile. 86 230 IPR005175 -
Aed3g1723 272 MobiDBLite consensus disorder prediction 1 25 - -
Aed3g1723 272 PIRSF ESCAROLA 2 263 IPR014476 GO:0003680
Aed3g1723 272 Gene3D - 90 223 - -
Aed3g1723 272 CDD DUF296 91 206 IPR005175 -
Aed3g1723 272 MobiDBLite consensus disorder prediction 213 246 - -
Aed3g1723 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 270 IPR014476 GO:0003680
Aed3g1723 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 10 270 - -
Aed3g1723 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 208 IPR005175 -
Aed3g1723 272 MobiDBLite consensus disorder prediction 213 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1723 Aed-Chr3 21866737 21867555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1723 44 271 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.343 9.72e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1723 - - gmx:100811053 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1723 3 21866737 21867555 Aed3g1723 3 21866737 21867555 ECH