Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1714 ATGGCACCAAGTTTTGATTGCGTTTCGAGCCTTCTCTGTGCGGAAGACAACAGTATTTTTGACGATAACGATTATGGGAGTTCGGTGGAGGTGTTGGAGGACACGTGGCAGCATCCCAGATACGATCGAAACGACCGTAGACAAAGTGAGAACTTGTTTGATGTCCCTAATGGGTGGTTTCCATTGCAGAGCGATGAGTGTTTGAGACTGATGCTGGAAAAGGAATGGGATCACTTGCCTAACGGTGATTACGTTAATAAGATCAGGAGTGGGGATTTGGACTTTGGGGCCAGAAAAGAGGCCATTGATTGGATTCAAAAGGTTCGAGAGCACTTTGGTTTTGGACCTCTCTGTGCATATCTATCCATAAACTACATGGACCGCTTCCTTTCTTCATATGAATTACCAAAGCATAGAGCTTGGACAATGCAATTGTTGGCTGTGGGGTGCTTATCTCTGGCTGCCAAAATGGAAGAGACTGATGTTCCTTTGTCTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAAGCTAAAACAATACAGAGGATGGAGCTTTTGGTTCTGAGCACATTGAAGTGGAGAATGCAGGCAATTACCCCATTTTCATTCATTGACTACTTCCTTAACAAGATCAATGATGATCAGAGTCCAATTGGAGCTTCAATTTTGCAATGCACACAGCTTATACTGAGTACTGTAAAAGGAATTGACTTCTTAGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTGCTTACTGAGAAAGCAATTTCTGTTCTGATTCAGCTTGTTGAAAAGGAGAGTGTCTTGAAGTGTGTTAAATTGATCCAAGAGCTGTCATCAGATGGTGGTGGTTGTTCTGCTAAGGGTGGTGCTAGTGCTTCTGTTTCTGTTTCTGTCCCTGGCGTGCCTAAAAGCCCAATAGGGGTGTTGAACAACACTGCATGCTTCAGCTACAAAAGTGATGACACAAATGCTGCTGCTTCATGTGCAAATTCTTCATCACATAACAACAATTGTAGTAGTCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTTCGGAGGATAG 1107 0.4363 MAPSFDCVSSLLCAEDNSIFDDNDYGSSVEVLEDTWQHPRYDRNDRRQSENLFDVPNGWFPLQSDECLRLMLEKEWDHLPNGDYVNKIRSGDLDFGARKEAIDWIQKVREHFGFGPLCAYLSINYMDRFLSSYELPKHRAWTMQLLAVGCLSLAAKMEETDVPLSLDLQVGESKYIFEAKTIQRMELLVLSTLKWRMQAITPFSFIDYFLNKINDDQSPIGASILQCTQLILSTVKGIDFLEFRPSEIAAAVAISVVGEGQTVLTEKAISVLIQLVEKESVLKCVKLIQELSSDGGGCSAKGGASASVSVSVPGVPKSPIGVLNNTACFSYKSDDTNAAASCANSSSHNNNCSSPDAKRRKLNKTFGG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1714 368 MobiDBLite consensus disorder prediction 354 368 - -
Aed3g1714 368 Pfam Cyclin, C-terminal domain 200 293 IPR004367 -
Aed3g1714 368 PANTHER CYCLINS 1 351 IPR039361 -
Aed3g1714 368 SUPERFAMILY Cyclin-like 182 290 IPR036915 -
Aed3g1714 368 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Aed3g1714 368 Gene3D - 81 198 - -
Aed3g1714 368 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 351 - -
Aed3g1714 368 SMART cyclin_7 103 191 IPR013763 -
Aed3g1714 368 CDD CYCLIN 98 190 IPR013763 -
Aed3g1714 368 Gene3D - 69 286 - -
Aed3g1714 368 MobiDBLite consensus disorder prediction 344 368 - -
Aed3g1714 368 SUPERFAMILY Cyclin-like 59 197 IPR036915 -
Aed3g1714 368 Pfam Cyclin, N-terminal domain 68 197 IPR006671 -
Aed3g1714 368 SMART Cyclin_C_2 200 313 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1714 Aed-Chr3 21757443 21761073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1714 68 343 Core Cell Cycle Gene Families AT2G22490 50.000 2.89e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1714 K18810 - gmx:100803873 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1714 3 21757443 21761073 Aed3g1714 3 21757443 21761073 ECH