Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1711 ATGCGCTACCTCACATGCAACGCTGAGTCCGCAACAGCCACATGCAACGCTCACTCCCTCAAGCACAAGAAAAAGCCCAAAAGCCCAACCCAGGCCCACACCGTACGACACTTCGCCTACTCCGACATTCTCGCCGCCACCAACAACTTCTCCGCCGACACCTTCCTAGGAAAAGGCAGCCACGGCAGTGTCTACAAGGCCACCCTCCACGGTGGCGCCCTCGTCGCCGCCGTCAAAAAAACCATACCCTCTAGCGAAATTCAAATCCTCTCCCACCTCGAGAAAAACCCTCGTCTCGTTAACCTAATTGGCTTCTGCAACGACCAAACCAACAACATTAAGAATAACAAACTCATTGTCGTAGAGTACATGCCCAACGGCTCGCTCCACGAGCTTCTCCATTCCACGAAAAACGCGATTCGGCCACCCGGTTGGACCGCGCGAGTCCGGTTCGCGGTTCAGGTTGCGAAAGCAGTTCGAGGTTTACACTCTTCCGAACCGCCCGTGATTCACAGGGACATCAAATCGTCCAATGTGCTGATTGACGAAAAGTGGAACGCGCGGCTCGGCGACTTCGGACTCGCCGTCAGGGGACACGTGGCGGATTCTCGCGTGCCTCCGGCGGGGACGTTAGGGTACCTCGACCCGTGCTATCTTGCGCCGGGAGATCTGAGTTTCAAGAGCGACGTTTTCAGCTTCGGCGTTCTGCTGCTCGAGATCGCGAGTGGGAGGCACGCGATCGACGTGAGGCACAGTCCGCCGTCGGTGTTGGACTGGGCGGTGCCGCTCGTGCGCCGCGGCGAGTTTCGGGAGATTTGCGATCCGCGGATCGCGCCGCCGCCGGACATGGTGGCGTTCCGGCGGATGGTTGTGCTGGCGGCGAGGTGCGTGCGGTCCACGGCGGAGAGGCGACCCTCGATGGCGGAGGTGGTGGAGTGTCTCGCGGCGGTGAGGAGAAGCTTTCGCGCTCCGGTGATGTGGAAGAGAATAAAAATAAAAAAGCGCGTGGATTCGGCGCGTGGGGATACATTCCCTGATTGGGACAGGAGTGAGGAAGTAGTTAGAGTAGTTAAGGGAGGAAGTAGAAGGAACGGGAAAGTATCTAGTGTGTCGGGTGTAGTGTATGATAGTGGACCCGCGAATCAAGCGGTGAGATCTAGATCGGTTGGTTCTGGTTCGGGTTTGGATGGGTATTGGAACCAAATTGGGTTCGGGTTCGGAAATAGGAAAGGGAAAGCGAGGCTAAAGAGATCGAGGTCTATGGGGTTTTTGAGACATAACGGTAATACTAATAATGATGTAGTTAGTTCGAAAGAGATGGCGTTGTCCAAGTTGGGAATTAAGGACAAGAAGTTGGAACAGAGAATGCTGGAAAAACCGTTAGTTTATTAA 1392 0.5546 MRYLTCNAESATATCNAHSLKHKKKPKSPTQAHTVRHFAYSDILAATNNFSADTFLGKGSHGSVYKATLHGGALVAAVKKTIPSSEIQILSHLEKNPRLVNLIGFCNDQTNNIKNNKLIVVEYMPNGSLHELLHSTKNAIRPPGWTARVRFAVQVAKAVRGLHSSEPPVIHRDIKSSNVLIDEKWNARLGDFGLAVRGHVADSRVPPAGTLGYLDPCYLAPGDLSFKSDVFSFGVLLLEIASGRHAIDVRHSPPSVLDWAVPLVRRGEFREICDPRIAPPPDMVAFRRMVVLAARCVRSTAERRPSMAEVVECLAAVRRSFRAPVMWKRIKIKKRVDSARGDTFPDWDRSEEVVRVVKGGSRRNGKVSSVSGVVYDSGPANQAVRSRSVGSGSGLDGYWNQIGFGFGNRKGKARLKRSRSMGFLRHNGNTNNDVVSSKEMALSKLGIKDKKLEQRMLEKPLVY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1711 463 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
Aed3g1711 463 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
Aed3g1711 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Aed3g1711 463 Gene3D Phosphorylase Kinase; domain 1 10 123 - -
Aed3g1711 463 SMART serkin_6 50 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1711 463 PANTHER OS01G0253100 PROTEIN 1 356 IPR045271 GO:0004714|GO:0006468
Aed3g1711 463 Gene3D Transferase(Phosphotransferase) domain 1 124 338 - -
Aed3g1711 463 Pfam Protein kinase domain 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1711 463 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 356 - -
Aed3g1711 463 ProSiteProfiles Protein kinase domain profile. 50 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1711 Aed-Chr3 21720652 21722043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1711 36 314 Receptor kinase-like Gene Family AT3G59420 43.919 3.07e-65 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aed3g1711 Pkinase 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1711 - - gmx:100811580 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1711 3 21720652 21722043 Aed3g1711 3 21720652 21722043 ECH
Aed3g1711 3 21720652 21722043 Aed10g0126 10 964933 966447 PCT