Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1705 ATGAAAAAGAAACGAAAGGAAGCCGAGGGTTCGAGCTTACCGGAGATTTCGAAGTCGCATTACTCGCTGAAGCGGTGTTCACGGCTAAACAAGCGGTGCAGGGAAGACGGCGTGGAGACGGTGCCGCCATGCGGCGCGTCGTTACTCTTAACGCCGTCGAGGGGGCTAAAGCGGAAGATAGGATGCATCGACAAGGCGACGCAGATGGGGCTTAGCGAGAGGAGGATCGAGAAAGATTACGTGACCGGGGGAAGCGCGATCGGGCAGGGGAAGTTCGGGTCAGTGACGCTGTGCCGCGCACGTGCCGCCGGAGGTGGAAAAGGAGGGGAGTACGCGTGCAAGACGCTTAAGAAGGGGGAGGAGACGGTGCACAGGGAGGTGGAGATAATGCAGCACGTGTCGGGGCACCCTGGAGTGGTGACACTGGAGGCGGTGTATGAGGACGCGGAGTGCTGGCATCTTGTGATGGAGCTTTGCTCCGGAGGGAGGTTGGTTGATAGGATGAGAGAAGGGCCGTGTTCGGAACACGTGGCGGCGGGGATACTGAAGGAGGTGATGCTTGTGGTTAAGTACTGCCATGACATGGGCGTGGTGCATAGGGATATCAAGCCTGAGAATGTTTTGCTCACTGCGGCAGGGAGGATCAAGCTCGCAGATTTCGGCCTCGCCATCAGGATTTCCGAGGGTCAGAATTTGACAGGTGTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCTGGGGTGCTCCTGCATGCTTTGTTGGTTGGTGGTCTTCCATTTAAAGGAGATTCACCTGAAGCAGTTTTTGAGGAAATTAAGAATGTCAAACTAGATTTTCAAACAGGGGTGTGGGAATCATCAATATCTAAACCTGCACGAGATCTTATTGGGAGAATGTTGACAAGGGATGTTTCAGCCAGGATAACAGCTGATGAAGTACTAAGGCATCCATGGATATTGTTCTACACTGAGCGCACATTGAAGATGTTGCCCATTAAATCAAAATTGAAACTCCAAAATGCAACAACTGCTTACCGCAAGTTTGTTTCTGCACCTGAATCTAGGTTAGGAGGAAACAAGATAGATGATGCTGATGGTTCCCTTGATGAGGAGGACTATTCAAGCCCGTTTTCATCCTCTGAAAGTTGCAATTCAGAATATCATGATGACAGTGTATGGATTGATGCACTTGCCACTGCAGTTTCACATGTGAGGATATCCGACACAAAGAGGACCAAGTTGTGGGGTCCCACTGGTCCAATTGATCAACAAGGTTCATCTAACATGAAGACTAACCTCTGTAAAGCATTCTGA 1356 0.5066 MKKKRKEAEGSSLPEISKSHYSLKRCSRLNKRCREDGVETVPPCGASLLLTPSRGLKRKIGCIDKATQMGLSERRIEKDYVTGGSAIGQGKFGSVTLCRARAAGGGKGGEYACKTLKKGEETVHREVEIMQHVSGHPGVVTLEAVYEDAECWHLVMELCSGGRLVDRMREGPCSEHVAAGILKEVMLVVKYCHDMGVVHRDIKPENVLLTAAGRIKLADFGLAIRISEGQNLTGVAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGGLPFKGDSPEAVFEEIKNVKLDFQTGVWESSISKPARDLIGRMLTRDVSARITADEVLRHPWILFYTERTLKMLPIKSKLKLQNATTAYRKFVSAPESRLGGNKIDDADGSLDEEDYSSPFSSSESCNSEYHDDSVWIDALATAVSHVRISDTKRTKLWGPTGPIDQQGSSNMKTNLCKAF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1705 451 SMART serkin_6 81 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1705 451 SUPERFAMILY Protein kinase-like (PK-like) 82 358 IPR011009 -
Aed3g1705 451 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 444 - -
Aed3g1705 451 Pfam Protein kinase domain 85 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1705 451 ProSitePatterns Protein kinases ATP-binding region signature. 87 114 IPR017441 GO:0005524
Aed3g1705 451 Gene3D Transferase(Phosphotransferase) domain 1 73 376 - -
Aed3g1705 451 CDD STKc_CAMK 84 332 - -
Aed3g1705 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Aed3g1705 451 ProSiteProfiles Protein kinase domain profile. 81 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1705 451 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 13 444 - -
Aed3g1705 451 MobiDBLite consensus disorder prediction 370 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1705 Aed-Chr3 21683262 21686687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1705 64 333 EF-hand Containing Proteins AT4G04720 44.128 4.94e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed3g1705 Pkinase 3.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1705 - - gmx:100801753 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1705 3 21683262 21686687 Aed3g1705 3 21683262 21686687 ECH
Aed3g1705 3 21683262 21686687 Aed10g0165 10 1311684 1316095 PCT