Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1695 ATGGCTAGCAAACACAGAAAACTCTTCCCTGATGAAACAGCAACAACAAACACAAACCAAACACAAGATTGCTATGGCTTTTGTGACCCAGCATGCCCTTACAATTGCTATTCGAACCCTGATTACTTTTATTCTCCACCACCACCTTCTATTTCACACTCAAACCAATTTAACCATGTACCTTCTTACTTGATCATTCTGGTTACTCTATTCACAGTTGTTTTTGTTGTGGTTGGTTTCTACGTTATCAAAGTGAAGTGCTATGCTGCATGGTGCGGGTGGAGATTCGACGGTTCCGTTCCCTCTCAATCAGACGCCACCACCACCGAGGAGTTTCTAAATGAGAACCAAGTTGATCACCACCCCGTGTGGCTCATCGCCACCGTGGGGCTGCAACAATCGGTCATAAACTCTATCACGGTTTGCAGGTACAAGAAGAACGAAGGGTTGGTCGAAGGAACCGAATGTTCGGTGTGTTTGAACGAGTTTCGAGAAGAGGAGATACTGAGACTCTTGCCGAAGTGCAACCATGCTTTTCATGTTCCTTGTATTGACACTTGGTTGAGATCACACACAAATTGTCCTCTTTGTCGTGCCGGTATTGTTTCTAACAGTGTTGTCACTTCCGACGCACAAATGTCGAATATGGAGCAGGAAAATGCAAACTTGCGGACAAATCAAGATACCCTTTTGGAAAATTCACGGATTAATGAAGGTGGGTTAAGCAGCAACAACATGATTGCAGGGGAATCAAGTGAAGCAGTACTCGATGAATCAAATTCTAAGGTAAATGACCAAACTCAGAACAATGTTTCAACTACAGAATCTGAAAGCCATCGTGTTGTTGATGATGGTGAGTACCACTACTTAAAAACGTGTAAAACAGCATTGCGTCGTTCATCTATTGAAGAGTGTTTGCATTTAAGCCCGGTTTCTATGAAAAGGTCATTCCCCTCCTGCAATATTGGAAGGATTCTAGCTTCGAGAGGTTACATAAGTCTAAACTCTAAACTCCATTCATCACTGTTAGAATTTTCAATCTGTTAG 1047 0.426 MASKHRKLFPDETATTNTNQTQDCYGFCDPACPYNCYSNPDYFYSPPPPSISHSNQFNHVPSYLIILVTLFTVVFVVVGFYVIKVKCYAAWCGWRFDGSVPSQSDATTTEEFLNENQVDHHPVWLIATVGLQQSVINSITVCRYKKNEGLVEGTECSVCLNEFREEEILRLLPKCNHAFHVPCIDTWLRSHTNCPLCRAGIVSNSVVTSDAQMSNMEQENANLRTNQDTLLENSRINEGGLSSNNMIAGESSEAVLDESNSKVNDQTQNNVSTTESESHRVVDDGEYHYLKTCKTALRRSSIEECLHLSPVSMKRSFPSCNIGRILASRGYISLNSKLHSSLLEFSIC 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1695 348 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 284 IPR044675 -
Aed3g1695 348 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 284 - -
Aed3g1695 348 SMART ring_2 156 197 IPR001841 -
Aed3g1695 348 SUPERFAMILY RING/U-box 146 204 - -
Aed3g1695 348 MobiDBLite consensus disorder prediction 257 279 - -
Aed3g1695 348 ProSiteProfiles Zinc finger RING-type profile. 156 198 IPR001841 -
Aed3g1695 348 Coils Coil 213 233 - -
Aed3g1695 348 CDD RING-H2_PA-TM-RING 155 198 - -
Aed3g1695 348 Pfam Ring finger domain 155 198 IPR001841 -
Aed3g1695 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 206 IPR013083 -
Aed3g1695 348 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1695 Aed-Chr3 21604215 21605261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1695 4 208 C3H Transcription Factor Family AT1G72220 47.414 7.60e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1695 - - gmx:100805705 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1695 3 21604215 21605261 Aed3g1695 3 21604215 21605261 ECH