Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1680 ATGGAGCGCTATGAGATCCTCAAAGATATTGGTTCAGGAAATTTTGCTGTGGCCAAGCTTGTTAGAGACAACTGCACCAATGAGCTTTTTGCTGTCAAGTTTATTGAGAGAGGCCAGAAGCAAATCTGTCATAGAGATCTTAAGCTTGAAAACACACTCTTAGATGGAAGCACCGCACCACGAGTCAAAATTTGTGACTTTGGTTACTCAAAGTCATCAGTATTGCATTCACAACCTAAGTCTACAGTAGGAACTCCAGCTTACATTGCACCTGAGGTTCTAACCAGGAAAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATATGTGATGTTAGTTGGGGCTTATCCTTTTGAAGACCCTGCAGATCCAAGAAACTTCAAAAAAACCATTGGTAGAATAACAATACCAGAAATTAAAAACCATCCATGGTTTTTAAGGAACTTGCCCATAGAACTGATGGAAGATGCAAGCTGGCAAATAAATGATGTAAATAATCCATCACAAAGTGTAGAGGAAGTCCTGTCTATTATACAAGAGGCAAGAAAATCTCTCCATGTTCCCAAGGTTGGTGGTGGCCTTCTTACTGGGGGAAGCATGGACATTGATGACTTGGATGCTGATGAAGATCTTGAAGATCTAGAAACAAGTGGCGAATTTGTGTGCCCTATTTAA 690 0.4043 MERYEILKDIGSGNFAVAKLVRDNCTNELFAVKFIERGQKQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPADPRNFKKTIGRITIPEIKNHPWFLRNLPIELMEDASWQINDVNNPSQSVEEVLSIIQEARKSLHVPKVGGGLLTGGSMDIDDLDADEDLEDLETSGEFVCPI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1680 229 PANTHER SERINE/THREONINE KINASE 138 223 - -
Aed3g1680 229 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 40 - -
Aed3g1680 229 Pfam Protein kinase domain 40 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1680 229 Gene3D Phosphorylase Kinase; domain 1 1 42 - -
Aed3g1680 229 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 41 138 - -
Aed3g1680 229 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1680 229 SUPERFAMILY Protein kinase-like (PK-like) 2 173 IPR011009 -
Aed3g1680 229 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 138 223 - -
Aed3g1680 229 Gene3D Transferase(Phosphotransferase) domain 1 43 194 - -
Aed3g1680 229 PANTHER SERINE/THREONINE KINASE 41 138 - -
Aed3g1680 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
Aed3g1680 229 SMART serkin_6 4 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1680 229 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aed3g1680 229 PANTHER SERINE/THREONINE KINASE 2 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1680 Aed-Chr3 21517752 21521460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1680 4 169 CBL-interacting serine-threonine protein kinases AT4G24400 35.437 3.85e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed3g1680 Pkinase 6.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1680 K14498 - gmx:100798091 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1680 3 21517752 21521460 Aed3g1680 3 21517752 21521460 ECH