Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1664 ATGATGAATCAAAACCAGCTTCAGCCTCTGCCTCTGCTTAGCAGCTTCCTAGGTTCATCTCCTGAGGAATCTTTGCTACAACAAAACCAAAATGATGAAAATGAAAATGCTAAGGCTGCAATATGCCATGGTCTTGTTGAGGATGTCACAGTGGCATTACACATAGGCCTCCCTAACCATTCAAGTGCTTCAAATTCCAACAATAATAGTCATGGATTTGTGAATGCCACAACAACTCAACAACAAGTTCCTAACAATTACTGGATTCCAACTCAGGAGCAGATCCTCATTGGCTTCAGCCATTTCTCTTGTCCTATGCACATGTGGGGACACGGTTCACAGTACCGGAGAGGCCCAGACTCACTGAGACGAACCCATCCGCGGCCATTGCTGGACATCCCATGCTACTGCTGCGCACGAGGGTGCAAGAACAGCATCGAGCACGCACGTGCGAAGCCACTCAAGGACTTCCGAACCCTTCAGACGCACTACAAGAGGAAGCATGGCGCGAAGCCCTTCACGTGCCGCAAGTGTGCCAAGCCCCTCGCCGTGAAGGGTGACTGGCGAACCCACGAAAAGAACTGCGGCAAACGGTGGCTTTGTATCTGTGGCTCTGACTTCAAGCACAAGAGGTCCCTCAAAGATCATATCAAGGCGTTTGGGCTTGGTCACACTCCTTTATCTTCTTCTTCGTCTCGTGACGGCATGTGA 711 0.5007 MMNQNQLQPLPLLSSFLGSSPEESLLQQNQNDENENAKAAICHGLVEDVTVALHIGLPNHSSASNSNNNSHGFVNATTTQQQVPNNYWIPTQEQILIGFSHFSCPMHMWGHGSQYRRGPDSLRRTHPRPLLDIPCYCCARGCKNSIEHARAKPLKDFRTLQTHYKRKHGAKPFTCRKCAKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIKAFGLGHTPLSSSSSRDGM 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1664 236 PANTHER ZINC FINGER PROTEIN WIP2 6 228 IPR043584 GO:0003700|GO:0010468
Aed3g1664 236 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 6 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1664 Aed-Chr3 21303748 21305711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1664 49 229 C2H2 Transcription Factor Family AT1G34790 61.576 1.98e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed3g1664 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1664 - - gmx:100795704 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1664 3 21303748 21305711 Aed3g1664 3 21303748 21305711 ECH