Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1652 ATGGGATATGAGTTGAAGGAATGGGAAAATCCACAATCTCTCAACCTTTTTTGCCTAGAAGCCTTCAACAAAAGGTCTCCCCAAAGGGGCTATGAGAGTCTCTCAGCAAGAGCAGTTCAATATGCTGGAGGAGTTCCGTTAGCTCTTAGAGTTTTGGGTTCACATTTTCGTAAGAAACCAACGGAATTCTGGGAAAGTACTTTGAAAGAACTCCACAAGTATCCTCAAGATAAAACTCGCAGAGTGTTGGAAGTCAGCTACACTGAATTACATGATCTAGAAAAGAATATATTTCTAGATGTTGCATTCTTTTTCAAAGAAAAACAGAAAGATCATGTTCTCAGGATATTAGAAGCTTGTGGTTTTGAACCAACTATAGGAATAGAAAATCTTGCACGCAAAGCTTTGTTAAGTGTTTCAAAGAGCAAGATAATACAAATGCATGACTTGATACAACAAATGGGTTTGGAGATAGTACGTCTAGAAGATAGATATGATCTTGGAAAACGTAGTCGATTGAAGGATAATGATGCTCGTGAAGTCATTGAAAATAACAAGGGAACTAATGCAATTCAAGGCATAGCGTTGGATTTGTCTCAAATTGAAAATTTACCTTTGCGTGTTGACACATTCACAAAGATGAAAACCTTAAGATTTATTAAATTCTACAACACCTTAGGTCAGAGTTCTACTTCTATTAATACATACCTCAACCTTCCTGCAACTCTTGAGTCATTTTCTGATCAACTGCGGTACATTGAGTGGTTCGGATATCCATTTGAGTCTCTTCCGTCATCTTTCTATGCTGAGTTGCTTGTTGAGATTCACATGCCACACAGCAAAGTTAAACAACTTTGGCAGGGAGTGCAGGAACTTAATAATTTAGAGAGAATTGAGCTAAGTGGATGCAAGCAGTTTGAAAAAGTTCCAGATTTGTCTAAGGCGCAGAAACTGAGATGGGTTAATCTTTCCTATTATGAAAGTTTGCACTATCTTCATCCATCTGTTTTATCCTCTGACACGCTTGTTACTTTGATACTGGATGGGTGTACAAGGCTAAAGAGTGTCAAAGGTAAGCATGTCAAATCTCTAAAGGAGATCAGTGTGACTAGGTGCTTAAGTATGAAGGAATTTGCAGTGTCATCAGATTTAATTGAAATCTTGGATTTGAGCAACACAGGAATCCAAAGACTGGGCACACAAATAGGGCGTATGAAGAAACTTTGGCGGCTCAATCTTGAGGGTTTAAGACTTAGGCATTTTGTAAAGGAGTTATCTTGGCTGACATCTCTCAAGGAGCTGATGCTTTGTGATACTTTGGCAGTAATTGAAAAAGAGAAACTACGTGTCCTGTTTGATGGGACAAGGTCACTAGAAAAACTACATATGAAGGACATGTGTAACTTATTTGAACTCCCCGACAACATCAGTGCCTTATCAAAATTACAAGAACTAAGGCTAGATGGAAGCAATGTGAAAAGCTTGCCTGAAATTGAGAAACTTGAAATGTTGGAAATTCTGTCCTTGGAGAATTGCGAGTTACTTCACTGCCTACCAAAGCTTCCTTCCCGCATAAAATACTTAGGTGCCATTAACTGCGAGTCATTGGCGTCAGTGTCAAACTTGAACACTTTGGCTACAAAGATGTGGGGGATGGCCAAATTCATCACATTCAAGAATAGCTTGAAATTGGTGGGAGGTCGTCCATGGGAACTTATTACGGAAAGCATCCAGTTAACAATGATGCATGCTGTATTTGACAATGTGCGAAGTAGACACATTGACTCACATGGATACAACTATACCAGTGTTCAGCTTTGTTTACCAGGAAACATGGTCCCAAGCCAGATCAAATATCAAGCCACTAAGTCATCCATAACCGTCAAACTTCCCGTCAAACGTTCCAGCTTGATGGGCTTCATTTATACAGTGGTTGTTGGTAAAATGGGAACGAAGAAGCAGAAGATAAAATGTAAATGCCTCTTGCCAATAGAAGGCATGATGGAGGAAGCGTGGCTAGATAGTGACATTGAGGGATTGGAGTCGGATCATGTTTATGTATGGTATGATCCATTGCACTGTGACAGCATTCTTCAATATCATTATGATCAACCAGAGGCTCGTTTTGAGTTTTGTGTTGCAGATGATAATGGGAAAGTTGATCATGGTTCAATCTGTATTAAAAAGTGTGGGATACGCCTTGTAACTGATTCAGAAGTGCCCGTTGTCTTAGATGGCTTGAAATCAGAGTTGGATTCAGACACTAGAAAAACAATGGACTGGACAGTTCAACGGATGAAAGCCTACACTGATAGAAGACATGGTACAAAATCCAACACAGAGATAGTTGAACTAGATTCAGCTGAAGAAGGTAATGATGAAAGGAAGAAAAGCCAGTATTCTGATGTGGAAGAGAGCTTCAAATCTACTCACAAAGAAACGGATACCGATTCTGCAACAAATGATAGTAGGCAGAATACCAGAGGATCTACAGAAAAGTCAATATCTGAACGAGAAGATGGCGCTACAACTGAAGGCCGGGATCAAATTTCAAAATCTAAGTCGACAGAGGTTCTTTCTGAACCTACTGTTGAAAAAAGACCCAATGTTGAAGCTGAAAACCAAGAGCAGCCAATAATCGAACCAGAAGACAAATCGAGAACCAAGAAGAAACTAAGGTTGACCGAGCAGCCAATAATCGAACCAGAAGACAAATCGAGAACCAAGAAGAAACTAAGGTTGACCGAGTACTTTGAATCAAGTGATCAACATCAACAACAATCCTTAACAAAATATGATGGGAATTTTGAAGTTGCTTTGGAAGAACTTCGAGAACTGGCCTTTTCCCAATCCATGACCAAAAATGTTAAAGATGCCGAGTTTGGAAAAAAGCTTGAAGCTGCCGTTCAAAAACTTGAAAATTTCCCCCAAGAGTTAAACGAAGAGCTAAATGGGAAAATCAAGTCTTTCTTCGATCTCTACAAGCAAGCATGCAAAAATGTAAAAGAACAAGAAGTAACTCGTGATACCATCACCCGGATTACCGCAGAAAAGGATGCAGATTTGAACAAACTGAAAACTGCATGGAGCCGAGTTAATCAACTTAAATATGCCATTTTGGAGAGAGAGCCGAAAATTGAAGGACTCAGAATGAAAGAGACTGATTTCAACGATAAAATAAAGAAGTTACAAGAGGAGCTGAAAATTGAAGAACTCAGAAAGCATGAGACTGATTTCAATGACAAAATAAACAAGTTACAAGAGGAGCTAAGTGGTGTTGAAAAAGACAAGGCAAGGCTTGAAGCTGCACAAGCAGAGAATGTTGCTGAGAAGACAGATGTTGTTGCTTCAGCAAAACATGTCTCTACTAACTTAGGCAGGCTTCTTAAACAAGAGAAGGAGCTTGACGAGGCACAGGCCAAACTTGACAGAGAATTTCAGGCCTTAAAAAGGCATTACAATAAGATGAGAGTTGAGCCTCCTTTTTAG 3489 0.3947 MGYELKEWENPQSLNLFCLEAFNKRSPQRGYESLSARAVQYAGGVPLALRVLGSHFRKKPTEFWESTLKELHKYPQDKTRRVLEVSYTELHDLEKNIFLDVAFFFKEKQKDHVLRILEACGFEPTIGIENLARKALLSVSKSKIIQMHDLIQQMGLEIVRLEDRYDLGKRSRLKDNDAREVIENNKGTNAIQGIALDLSQIENLPLRVDTFTKMKTLRFIKFYNTLGQSSTSINTYLNLPATLESFSDQLRYIEWFGYPFESLPSSFYAELLVEIHMPHSKVKQLWQGVQELNNLERIELSGCKQFEKVPDLSKAQKLRWVNLSYYESLHYLHPSVLSSDTLVTLILDGCTRLKSVKGKHVKSLKEISVTRCLSMKEFAVSSDLIEILDLSNTGIQRLGTQIGRMKKLWRLNLEGLRLRHFVKELSWLTSLKELMLCDTLAVIEKEKLRVLFDGTRSLEKLHMKDMCNLFELPDNISALSKLQELRLDGSNVKSLPEIEKLEMLEILSLENCELLHCLPKLPSRIKYLGAINCESLASVSNLNTLATKMWGMAKFITFKNSLKLVGGRPWELITESIQLTMMHAVFDNVRSRHIDSHGYNYTSVQLCLPGNMVPSQIKYQATKSSITVKLPVKRSSLMGFIYTVVVGKMGTKKQKIKCKCLLPIEGMMEEAWLDSDIEGLESDHVYVWYDPLHCDSILQYHYDQPEARFEFCVADDNGKVDHGSICIKKCGIRLVTDSEVPVVLDGLKSELDSDTRKTMDWTVQRMKAYTDRRHGTKSNTEIVELDSAEEGNDERKKSQYSDVEESFKSTHKETDTDSATNDSRQNTRGSTEKSISEREDGATTEGRDQISKSKSTEVLSEPTVEKRPNVEAENQEQPIIEPEDKSRTKKKLRLTEQPIIEPEDKSRTKKKLRLTEYFESSDQHQQQSLTKYDGNFEVALEELRELAFSQSMTKNVKDAEFGKKLEAAVQKLENFPQELNEELNGKIKSFFDLYKQACKNVKEQEVTRDTITRITAEKDADLNKLKTAWSRVNQLKYAILEREPKIEGLRMKETDFNDKIKKLQEELKIEELRKHETDFNDKINKLQEELSGVEKDKARLEAAQAENVAEKTDVVASAKHVSTNLGRLLKQEKELDEAQAKLDREFQALKRHYNKMRVEPPF 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1652 1162 Pfam Leucine Rich Repeat 272 290 IPR011713 -
Aed3g1652 1162 Pfam C-JID domain 608 739 IPR045344 -
Aed3g1652 1162 MobiDBLite consensus disorder prediction 770 819 - -
Aed3g1652 1162 Coils Coil 1046 1103 - -
Aed3g1652 1162 PANTHER NB-ARC DOMAIN PROTEIN 4 956 - -
Aed3g1652 1162 MobiDBLite consensus disorder prediction 770 892 - -
Aed3g1652 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 100 IPR027417 -
Aed3g1652 1162 PRINTS Disease resistance protein signature 290 306 - -
Aed3g1652 1162 PRINTS Disease resistance protein signature 42 56 - -
Aed3g1652 1162 MobiDBLite consensus disorder prediction 831 892 - -
Aed3g1652 1162 Coils Coil 1128 1155 - -
Aed3g1652 1162 Gene3D Ribonuclease Inhibitor 162 383 IPR032675 -
Aed3g1652 1162 Gene3D Ribonuclease Inhibitor 384 555 IPR032675 -
Aed3g1652 1162 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 956 IPR044974 GO:0006952
Aed3g1652 1162 SUPERFAMILY L domain-like 146 520 - -
Aed3g1652 1162 Gene3D - 9 91 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1652 Aed-Chr3 21148742 21161497 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1652 3 736 WRKY Transcription Factor Family AT5G45050 26.232 5.58e-58 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1652 - - vun:114165831 1025.77