Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1631 ATGTCCAAAATGGGTGATCCAGCTGGTGAAAATCCCGAAACGAAAGAGATGGATGAGAGAAATTTGGCATCTTCACAAGGCCAAGAGCCATATGTCCACAAGGTTGGAATTCCTCCAAGACAAAACCTTTTCAAGGAATTCCAATCCACTGTAAAAGAAACGTTTTTCGCGGATGATCCTCTACGGTCCTTCAAGGATCAATCCAAGTCCCGGAAGCTCGTCCTCGGAATCGAAGCCATCTTCCCCATAATTAGCTGGGGGAGAACTTATAATCTCACAAAATTTAGAGGTGACCTTATTGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACCTGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAGTGAGATTGACCCCATTGCAAATCCGGTTAGGATTTTTGATTGATTTCCTATCTCATGCTGCAATTGTCGGTTTTATGGGGGGAGCCGCCATCACAATTGCCCTTCAACAGCTCAAGGGCTTCCTTGGGATTATAAAGTTCACAAAGAAAACTGATGTTATCTCTGTGATGCATTCAGTGCTGTCATCAGCACATCATGGATGGAATTGGCAAACTATAGTAATTGGAGCTTCCTTTCTGGCTTTTCTTCTGTTTGCTAAGTATATTGGAAAGAAGAACCCAAAATTCTTTTGGGTGCCAGCAATTGCCCCGTTGATATCTGTTATTCTCTCTACCCTTTTTGTATTCTTAACCCGTGCAGACAAATATGGTGTTGCAATTGTAAAACATATAGAGAAAGGGATCAATCCTTCATCTGTCAAAGAAATTTATTTTACTGGTGATTACCTTGGGAAAGGTTTCAGAATTGGCATCGTGGCCGGCATGATAGCATTGACTGAAGCCACAGCAATTGGAAGAACATTTGCTTCTATGAAGGACTATCAACTCGATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGTTATGTAGCAACCGGTTCTTTCTCTCGTTCAGCAGTGAATTTCATGTCTGGCTGTGAAACCGCAGTATCCAACATTATCATGTCTCTTGTTGTGTTCTTAACCTTGCAATTCCTCACGCCTCTTTTCAAATACACTCCAAATGCCATTCTTTCTGTAATCATCATTTCTGCTGTCATCAACCTTGTGGACTATAAGGCAGCAATTTTGATATGGAAGATCGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTTGGCGTTGTTTTTGCCTCAGTTGAGATAGGACTTTTAATTGCAGTCTCTATATCCTTTGCAAAGATCCTATTACAAGTCACAAGGCCTAGAACTGCAATTCTGGGGAAGATCCCTAGGACTACTGTCTACAGAAACATCCAACAATACCCTGAAGCCACAAGGGTTCCTGGTGTACTGATTATTAGAGTTGATTCTGCAATATATTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGCTGATGGATGAGGAAGAACTTGTGAAAGGAGACTACCAAACAAGAATCCAATTTTTGATAGTTGAGATGTCACTAATAGACAAGCTCCACACATCAAACTTTGCTGCTTTGCTTGGAGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATTCTGTTCACCAAAGCTGGATGAAGAACCTTGA 1686 0.4134 MSKMGDPAGENPETKEMDERNLASSQGQEPYVHKVGIPPRQNLFKEFQSTVKETFFADDPLRSFKDQSKSRKLVLGIEAIFPIISWGRTYNLTKFRGDLIAGLTIASLCIPQDLWQWFLSCWGLYFRVRLTPLQIRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIIKFTKKTDVISVMHSVLSSAHHGWNWQTIVIGASFLAFLLFAKYIGKKNPKFFWVPAIAPLISVILSTLFVFLTRADKYGVAIVKHIEKGINPSSVKEIYFTGDYLGKGFRIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMSGCETAVSNIIMSLVVFLTLQFLTPLFKYTPNAILSVIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEELVKGDYQTRIQFLIVEMSLIDKLHTSNFAALLGEDKIFLTVAEAVAFCSPKLDEEP 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1631 561 ProSiteProfiles STAS domain profile. 465 537 IPR002645 -
Aed3g1631 561 PANTHER SULFATE TRANSPORTER 525 561 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed3g1631 561 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 525 561 - -
Aed3g1631 561 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 134 524 - -
Aed3g1631 561 TIGRFAM sulP: sulfate permease 135 536 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed3g1631 561 MobiDBLite consensus disorder prediction 1 32 - -
Aed3g1631 561 Gene3D STAS domain 445 537 IPR036513 -
Aed3g1631 561 Pfam STAS domain 466 555 IPR002645 -
Aed3g1631 561 CDD STAS_SulP_like_sulfate_transporter 466 546 - -
Aed3g1631 561 PANTHER SULFATE TRANSPORTER 19 114 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed3g1631 561 PANTHER SULFATE TRANSPORTER 134 524 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed3g1631 561 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 19 114 - -
Aed3g1631 561 Pfam Sulfate permease family 135 413 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1631 Aed-Chr3 20891867 20898794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1631 1 560 Inorganic Solute Cotransporters AT1G22150 63.623 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1631 K17470 - mnt:21404388 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1631 3 20891867 20898794 Aed3g1631 3 20891867 20898794 ECH
Aed3g1631 3 20891867 20898794 Aed10g0230 10 1855810 1862184 PCT