Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1630 ATGAGAGAGCAACAAGGGGTCTTTCATCTTGAGGAGCATGGCCAGACAGAGAGGTCCCAGTGGGTGCTTGATTCTCCCAACCCACCCCCTCTCTGGAAGAAGCTTTTTAGTTCTGTCAAAGAAACCATTTTGCCTCATGGCAACAAATTCTGCTTCTCATCAAAGAGGAGAACTTCCCATGGACATGCACTCTCTTGCTTGCAGAATCTGTTCCCAATCATTAGTTGGTTGAAAGATTACAAAGCCTCCATGTTCAAAGATGACCTCTTGGCTGGCTTAACTCTTGCCAGCCTCTGCATTCCTCAGAGCATTGGATATGCTACTTTAGCTAAAGTTGCTCCTGAATATGGCCTGTGTAATGTTGTTCCTCCTCTTATTTATGCTATGATGGGGAGTTCAAGAGAAATTGCAATTGGTCCTGTGGCTGTAGTGTCAATGCTGTTAGCCTCTCTGGTCCCAAAAGTGGAAGATCCCGTTGGCAATCCTAATGCCTATAGAAATCTTGTCTTTACTGTGACTTTCTTCACTGGAATTTTTCAAACTGCATTTGGTGTTTTCAGAGCTGATAAGCATGGGGTTAATATAATAAAGCATGTCAAAGGAGGCATGAATCCAAGTTCAATTCACCAGTTGCAATTCCATGGTCCACATGTTGGACAAGCAGCCAAAATTGGATTGATTTGTTCAGTTATTGCCCTTACTGAAGCAATAGCGGTTGGTCGATCTTTTGCTTCCGTTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTGTCAATGGGATTCATGAACATTGCAGGGACTGCAGTGAATTTCAGTGCTGGATGTAAAACAGCAGTATCAAATATTGTGATGGCTATTACGGTGTTTTTGTCCCTGGAATTGTTTACAAGGCTCTTATACTACACCCCTGTGGCTATCCTTGCCTCTATCATCCTCTCTGCTCTTCCTGGATTAATTGACCTAAGTGAGGCTTGCTATATATGGAAGGTTGACAAATTGGACTTTCTTGCCTGTATTGGTGCTTTTCTTGGGGTCCTGTTTGCAACTGTAGAGATTGGTCTTCTTGTTGCAGTGATAATCTCGTTTGCAAAGATACTAGTACAATCAATTCGACCTGGAATAGAAGTTCTAGGCAGAGTTCCAAGAACAGAAGCCTTTTGTGATGTGACTCAATATCCCATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGCTCTGAATACTCAAGTGGGTCTCGCAAGATGAAGATGACCTTAAAGAAACCTCCAAGGGTCGGGTTCAAGCAGTGA 1299 0.4311 MREQQGVFHLEEHGQTERSQWVLDSPNPPPLWKKLFSSVKETILPHGNKFCFSSKRRTSHGHALSCLQNLFPIISWLKDYKASMFKDDLLAGLTLASLCIPQSIGYATLAKVAPEYGLCNVVPPLIYAMMGSSREIAIGPVAVVSMLLASLVPKVEDPVGNPNAYRNLVFTVTFFTGIFQTAFGVFRADKHGVNIIKHVKGGMNPSSIHQLQFHGPHVGQAAKIGLICSVIALTEAIAVGRSFASVKGYHLDGNKEMLSMGFMNIAGTAVNFSAGCKTAVSNIVMAITVFLSLELFTRLLYYTPVAILASIILSALPGLIDLSEACYIWKVDKLDFLACIGAFLGVLFATVEIGLLVAVIISFAKILVQSIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSEYSSGSRKMKMTLKKPPRVGFKQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1630 432 PANTHER SULFATE TRANSPORTER 187 410 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed3g1630 432 PANTHER SULFATE TRANSPORTER 11 187 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed3g1630 432 Pfam Sulfate permease family 85 187 IPR011547 GO:0016021
Aed3g1630 432 Pfam Sulfate permease family 188 340 IPR011547 GO:0016021
Aed3g1630 432 PANTHER SLC26A/SULP TRANSPORTER-RELATED 11 187 - -
Aed3g1630 432 PANTHER SLC26A/SULP TRANSPORTER-RELATED 187 410 - -
Aed3g1630 432 Gene3D STAS domain 372 418 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1630 Aed-Chr3 20878525 20885211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1630 187 409 Inorganic Solute Cotransporters AT5G10180 65.823 5.91e-107 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1630 K17469 - gmx:100776591 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1630 3 20878525 20885211 Aed3g1630 3 20878525 20885211 ECH
Aed3g1630 3 20878525 20885211 Aed10g0231 10 1874887 1879654 PCT