Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1627 ATGAAGAAGGTGACACGAAGAATTGTTTCAATCTTCGTGATCTCGATACTCTTCTGCTTCCAACAACAACTCGTCCACGTTTCTTCTTCGTCACCTTTCTTATACGCAAACCAGGTCTATGAGGAGTCTTCTGGTGGAAGAAATCTTAGACAGGAACAGGAACAAGCTCAAGAAGTGCGTTGCTCCAGGGAGAGAAGTAGGGCAGCTCAGAAAGTGATAGAGGAGTATTTGACACCATTTGTGGAACGAGAAAACTACAAGCTTTTGAGCAAGTGCAGACTCCACCCTGAAAATGATATATTCAGGGATCAGGAAGAGAATAAAATTTTCGTAGATAGACATGAATGGCGGTGTGGATATTGTAAGAAAATCTTTCGGGAAGAAAAATTTCTCGATCAGCATTTTGATAACAGACACTACAATCTTCTGAATATAAGTCATGGTAAGTGCTTGGCTGATTTATGTGGGGCGTTGCATTGTGATGCTGTGATGAATTTCAAATCCTCAAGAAGCAAGTGCAATCCGACCGCTGCTGCAAGAAACCGTCATCTATGTGAGAGTCTTGCTGACAATTGTTTTCCTATAAGTGGGGGTCCATCAGCAGGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAACAAAAACCCTTTTCTAGAGGAGGCAAGGATCAAAGTAGTTTCTTTCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGGTACAAAGTTGTAGTGATGTGAAGAGTCGAACCCAGGAGCTTCGTCGCATCTCAAAAGCTGGATGGAAATCAAAACCATCATGA 855 0.4257 MKKVTRRIVSIFVISILFCFQQQLVHVSSSSPFLYANQVYEESSGGRNLRQEQEQAQEVRCSRERSRAAQKVIEEYLTPFVERENYKLLSKCRLHPENDIFRDQEENKIFVDRHEWRCGYCKKIFREEKFLDQHFDNRHYNLLNISHGKCLADLCGALHCDAVMNFKSSRSKCNPTAAARNRHLCESLADNCFPISGGPSAGRLHELFLHQFCDAHTCSGKQKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLVQSCSDVKSRTQELRRISKAGWKSKPS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1627 284 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 284 - -
Aed3g1627 284 ProSitePatterns Zinc finger C2H2 type domain signature. 118 139 IPR013087 -
Aed3g1627 284 PANTHER ZINC FINGER PROTEIN-RELATED 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1627 Aed-Chr3 20839328 20842543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1627 36 284 C2H2 Transcription Factor Family AT5G63280 60.956 2.04e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1627 - - ccaj:109814494 485.337