Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1618 ATGGCCAAGAACCGTGAATCTGCTGCAAGATCAAGGGCAAAGAAGCAGGAGCACATTAATAAGTTAGAGAAAGAGAAGTGTCGCTTGCAGAAAATGAATAGCCACCTCAAAAAGCTGAAGGTACACTCAGCAATCTATATATATATTTTCAATGGGAAAAATAATTCATTTAATTATGTATTGAGTAAAGGAAAGGAGAATGAGCCAAAATTGCCTAACGAACCAGATCATAGCATTTGCCTAAATGAAGCTCAGTGTGTGCCCCAATTTAAAGGAATTGGATTCAGAGTTATTTTCAGCTACAACAACTCCCACTCCAAGATACCAGCTACGGCGTAG 339 0.3894 MAKNRESAARSRAKKQEHINKLEKEKCRLQKMNSHLKKLKVHSAIYIYIFNGKNNSFNYVLSKGKENEPKLPNEPDHSICLNEAQCVPQFKGIGFRVIFSYNNSHSKIPATA 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1618 112 Pfam bZIP transcription factor 1 38 IPR004827 GO:0003700|GO:0006355
Aed3g1618 112 SUPERFAMILY Leucine zipper domain 1 38 IPR046347 GO:0003700|GO:0006355
Aed3g1618 112 SMART brlzneu 1 56 IPR004827 GO:0003700|GO:0006355
Aed3g1618 112 Coils Coil 5 42 - -
Aed3g1618 112 MobiDBLite consensus disorder prediction 1 23 - -
Aed3g1618 112 Gene3D - 1 44 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1618 1 41 bZIP Transcription Factor Family AT4G34000 53.659 1.79e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed3g1618 bZIP_1 1.1e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1618 K14432 - gmx:100808654 76.2553