Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1616 ATGCTAAAATGTCTGCTTTCAGGGTTTATACATGCGAAGTGCACTAGATGTCAGTTATATGGGATCCTCTGGAACAATAAACCCAGTATGCCTATGCAGTTCATTTTGCTGCCTGTATCAACAGGGATAACTTTGTTTGAACTTGAATATGGACAATGGATTGAAGAGCAAGACAGACAGAATCAAGAACTGAGAAATGCACTGCAAACTCATGCATCTGATATGCAGCTTCATCAACTTGTTGGGAGTTGCATGAGCCACTATTCAAATCTTTTCAGGATGAAAACAGAAGCTGCAAAGGCTGATGTCTTCTATTTAATATCTGGTGCATGGAAATCATCAGTGGAACGCCTTTTTCTTTGGATTGGAGGATCTCGTCCCTCACAGCTCCTAAATATCATTGCACCACAGCTAGAGCCTTTGACAGATCAACAAATTTTGAGCATTAGCAACCTCAGGCTTTCATCTCAGCAAGCTGAAGATGCTCTCTCACTAGGATTGGACAAACTCCAGCAGAGTCTGGTTCACAACATGCCATCAGATCCATTGGTTGTAGGACTAGAAGGTTTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGGAACAAACTCTGATTCACATGTCTAGAATCCTGACAAATGGGCAAGCTGCTAAAGGCTTGCTGGCTATGGGGGAATACTTGCATCGTCTTCGCACTCTTAGTTCCTTATGGGCTGCTCGTTCATGTGATCCTTCCTTTCCCACTCAATTCTCAAATTGA 798 0.4311 MLKCLLSGFIHAKCTRCQLYGILWNNKPSMPMQFILLPVSTGITLFELEYGQWIEEQDRQNQELRNALQTHASDMQLHQLVGSCMSHYSNLFRMKTEAAKADVFYLISGAWKSSVERLFLWIGGSRPSQLLNIIAPQLEPLTDQQILSISNLRLSSQQAEDALSLGLDKLQQSLVHNMPSDPLVVGLEGFEMAAAMDKGEALEGFVNQADHLREQTLIHMSRILTNGQAAKGLLAMGEYLHRLRTLSSLWAARSCDPSFPTQFSN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1616 265 Coils Coil 54 74 - -
Aed3g1616 265 PANTHER FACTOR TGA7, PUTATIVE-RELATED 45 257 - -
Aed3g1616 265 ProSiteProfiles DOG1 domain profile. 43 253 IPR025422 GO:0006351|GO:0043565
Aed3g1616 265 Pfam Seed dormancy control 61 135 IPR025422 GO:0006351|GO:0043565
Aed3g1616 265 PANTHER TRANSCRIPTION FACTOR TGA9 45 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1616 Aed-Chr3 20715464 20720885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1616 39 258 Calmodulin-binding Proteins AT1G77920 61.991 2.44e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1616 K14431 - gmx:100775882 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1616 3 20715464 20720885 Aed3g1616 3 20715464 20720885 ECH
Aed3g1616 3 20715464 20720885 Aed10g0243 10 1979102 1983054 PCT