Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1605 ATGGCGGCTTCGGTTGACAACCGTCAATACGGCAGCAGCCACATAAACGGCGTCGTCGTCGCTCGCGGCTGCGTCCCGGCGGACCTCAAGCCACCTCCTATCCCGTTGGATTTCCAGCTGGACTCATCCGACGACGAAGAAAACGACGACGCTTCGTATCTCAAAGAGTTCATACAAAAAGCGAACGCGGAAACCGAGGCGTCGGTGCTGGACCCGCGCGACGAGGGAACTGCGGACCAGTGGATCGCACGGAACGCCTCCATGGTGCGACTCACAGGAAAGCATCCCTTCAACGCGGAGGCCCCACTCCCGCGCCTCATGCACCACGGCTTCATAACCCCAACCCCGCTCCACTACGTCCGCAACCACGGCCCGGTCCCGAGGGCAAAATGGGAAGACTGGACAGTCGAGATAACCGGTTTGGTCAAACGCCCAACCCGCCTCACCATGGAGAAACTCGTCCGGGAGTTCCCCCACCGCGAGTTCCCGGCAACTCTCGTCTGCGCCGGGAACCGCCGCAAGGAGCAGAACATGGTGAAGCAGAGCATCGGGTTCAACTGGGGCGCCGCGGGGGCCTCCACCTCGGTGTGGCGCGGCATCCCCCTCCGCCACGTGCTCCGCCGATGCGGGATCCTCTCACGTGCCAAGGGCGCGCTGCACGTGTGCTTCGAGGGCGCCGAGGATCTCCCGGGAGGAGGCGGGTCCAGGTACGGAACCAGCGTCAAGAGAGACCTCGCCATGGACCCTTCGCGTGACATCATCATCGCGTACATGCAAAACGGCGAGGCGCTTGCGCCGGATCACGGGTTCCCCGTGCGCATGATTATTCCCGGGTTCATCGGTGGTAGAATGGTGAAGTGGCTCAAACGCATTGTCGTTACTGAACATGAGTGCGATAATCATTATCACTATAAGGATAATAGAGTGCTCCCTTCTCACGTTGATGCAGAACTTGCTAATGATGAAGAATGGTGGTACAAGCCGGAATATATCATCAACGAGTTGAATATAAACTCAGTGATAACTACGCCTTGTCACGAAGAAATCTTACCCATCAACTCATGGACTACACAGAGACCTTATGTAATCAGAGGCTATGCATATTCCGGTGGTGGAAGGAAAGTGACACGTGTTGAGGTAACATTGGATGGTGGAGAGACGTGGCACGTGTGCATATTGGACCATACTGAGAGACCGAACAAATATGGCAAGTATTGGTGCTGGTGCTTCTGGTCTTTGGAGTTGGAAGTGCTGGACCTGATTGGGACCAAGGAGATTGCGGTTCGAGCTTGGGATGAGGGTCTCAACACCCAACCTGAAAACCTAATTTGGAATGTTATGGGCATGATGAACAATTGCTGGTTTAGAGTGAAAACAAATGTGTGCAAACCCCACAAAGGCGAAATCGGCATAGTGTTCGAGCACCCGACGCAACCAGGCAACCAACTTGGCGGGTGGATGGCAAAGGAAAGACACTTGGAGAAATCACAAGACCCGAAACCAAGCCTCAAGAAGAGTGTCTCCACGCCATTCATGAACACCACCTCCAAAATGTTCTCCATCTCCGAGGTCAAAAAGCACAGCAACCCCGACTCCGCCTGGATCATCGTCCACGGCTACAACTCAGACTCATCTCCCAACAACTCCGTGCATGGCAATTCTGAATTCACTCATTTGGCTCCTATTAAGGAAATCACAACAACACCAACACATAGTGTGGCTCTCCACCCACGCGAGAAAATCCCATGCAAGCTTGTGTCAAAGACGTCGATTTCCCACGACGTGAGGCTCTTCCGTTTTGCATTGCCCTCAGAGGACCAACTCTTGGGATTACCAGTGGGGAAGCACATTTTCGTGTGTGCCAGCATCGACGGCAAGCTATGCATGCGAGCCTACACTCCAACAAGTAGCGTGGACGAAGTAGGGTTCTTCGAACTACTCATAAAGGTTTACTTCAAAGGCGTGCACCCCAAGTTCCCAAACGGAGGACTCATGTCTCAGCATTTAGACTCTCTCACCATTGGGTCTACGTTGGACGTGAAAGGCCCATTGGGCCACATAGAGTACACCGGAAAAGGCAACTTCACGGTTCACGGAAAATCAAGATTCGCGAAGAGGCTAGCCATGCTGGCTGGTGGGACCGGGATCACACCAATTTACCAAGTGGCGCAAGCGATTTTAAAGGACCCAGAGGACCGCACCGAAATGCATGTGGTCTATGCGAATCGAACGGAGGATGATATATTACTAAGGGAGGAGTTGGATGAGTGGGCGAAGAAACATAGTGACCGATTCAAAGTGTGGTATGTGGTGGAAACCGCGAAGGAAAGCGGGTGGGGATACAGTGTGGGCTTCATCACGGAGAGTATCATGAGGGAGCATCTTCCAGAAGCGTCAAATGATGCCTTAGCTTTGACATGTGGGCCACCACCCATGATTCAGTTCGCGGTGCAACCTAATTTAGAGAAGATGGGATATGATGTCAAGAACGATTTGCTCGTGTTTTAG 2508 0.5347 MAASVDNRQYGSSHINGVVVARGCVPADLKPPPIPLDFQLDSSDDEENDDASYLKEFIQKANAETEASVLDPRDEGTADQWIARNASMVRLTGKHPFNAEAPLPRLMHHGFITPTPLHYVRNHGPVPRAKWEDWTVEITGLVKRPTRLTMEKLVREFPHREFPATLVCAGNRRKEQNMVKQSIGFNWGAAGASTSVWRGIPLRHVLRRCGILSRAKGALHVCFEGAEDLPGGGGSRYGTSVKRDLAMDPSRDIIIAYMQNGEALAPDHGFPVRMIIPGFIGGRMVKWLKRIVVTEHECDNHYHYKDNRVLPSHVDAELANDEEWWYKPEYIINELNINSVITTPCHEEILPINSWTTQRPYVIRGYAYSGGGRKVTRVEVTLDGGETWHVCILDHTERPNKYGKYWCWCFWSLELEVLDLIGTKEIAVRAWDEGLNTQPENLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQLGGWMAKERHLEKSQDPKPSLKKSVSTPFMNTTSKMFSISEVKKHSNPDSAWIIVHGYNSDSSPNNSVHGNSEFTHLAPIKEITTTPTHSVALHPREKIPCKLVSKTSISHDVRLFRFALPSEDQLLGLPVGKHIFVCASIDGKLCMRAYTPTSSVDEVGFFELLIKVYFKGVHPKFPNGGLMSQHLDSLTIGSTLDVKGPLGHIEYTGKGNFTVHGKSRFAKRLAMLAGGTGITPIYQVAQAILKDPEDRTEMHVVYANRTEDDILLREELDEWAKKHSDRFKVWYVVETAKESGWGYSVGFITESIMREHLPEASNDALALTCGPPPMIQFAVQPNLEKMGYDVKNDLLVF 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1605 835 Pfam Oxidoreductase NAD-binding domain 709 817 IPR001433 GO:0016491
Aed3g1605 835 Gene3D - 73 324 IPR036374 -
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 332 344 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 111 127 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 164 175 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 89 103 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 248 264 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 190 205 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 281 294 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 175 187 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 429 441 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 265 278 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 404 414 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 442 455 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 377 389 IPR008335 GO:0016491
Aed3g1605 835 PRINTS Eukaryotic molybdopterin domain signature 363 377 IPR008335 GO:0016491
Aed3g1605 835 PANTHER NITRATE REDUCTASE [NADH] 2 567 835 - -
Aed3g1605 835 PANTHER NITRATE REDUCTASE [NADH] 2 46 543 - -
Aed3g1605 835 Pfam Oxidoreductase molybdopterin binding domain 123 302 IPR000572 -
Aed3g1605 835 SUPERFAMILY E set domains 334 461 IPR014756 -
Aed3g1605 835 Gene3D - 685 835 IPR039261 -
Aed3g1605 835 PRINTS Cytochrome B5 reductase signature 630 637 - -
Aed3g1605 835 PRINTS Cytochrome B5 reductase signature 708 727 - -
Aed3g1605 835 PRINTS Cytochrome B5 reductase signature 609 620 - -
Aed3g1605 835 PRINTS Cytochrome B5 reductase signature 675 689 - -
Aed3g1605 835 PRINTS Cytochrome B5 reductase signature 746 757 - -
Aed3g1605 835 PRINTS Cytochrome B5 reductase signature 803 811 - -
Aed3g1605 835 CDD eukary_NR_Moco 74 459 - -
Aed3g1605 835 Gene3D - 334 508 - -
Aed3g1605 835 Pfam Mo-co oxidoreductase dimerisation domain 330 461 IPR005066 GO:0016491|GO:0030151
Aed3g1605 835 SUPERFAMILY Riboflavin synthase domain-like 573 691 IPR017938 -
Aed3g1605 835 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 677 829 IPR039261 -
Aed3g1605 835 PANTHER NADH-CYTOCHROME B5 REDUCTASE 567 835 IPR001834 GO:0016491
Aed3g1605 835 PANTHER NADH-CYTOCHROME B5 REDUCTASE 46 543 IPR001834 GO:0016491
Aed3g1605 835 Pfam Oxidoreductase FAD-binding domain 583 689 IPR008333 -
Aed3g1605 835 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 630 637 IPR001709 GO:0016491
Aed3g1605 835 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 803 811 IPR001709 GO:0016491
Aed3g1605 835 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 734 743 IPR001709 GO:0016491
Aed3g1605 835 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 746 757 IPR001709 GO:0016491
Aed3g1605 835 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 779 795 IPR001709 GO:0016491
Aed3g1605 835 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 708 727 IPR001709 GO:0016491
Aed3g1605 835 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 71 332 IPR036374 -
Aed3g1605 835 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 578 690 IPR017927 GO:0016491
Aed3g1605 835 PIRSF Nitr_rd_NADH 549 834 IPR012137 GO:0006809|GO:0042128|GO:0050464
Aed3g1605 835 PIRSF Nitr_rd_NADH 23 552 IPR012137 GO:0006809|GO:0042128|GO:0050464
Aed3g1605 835 CDD cyt_b5_reduct_like 583 830 - -
Aed3g1605 835 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 140 175 IPR022407 GO:0043546
Aed3g1605 835 Gene3D Translation factors 570 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1605 Aed-Chr3 20603870 20610785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1605 565 826 NADPH P450 reductases AT5G17770 40.909 8.91e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1605 K10534 - gmx:100813471 1472.6