Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1603 ATGAACAACTCCTGGTATAGGGTGAAAACAAATGTGGCCAAGCCTGCGAAGGGTGAGATAGGCATAGTGTTTGAACACCCTGCTCAAGCAGGAAACCAACCCGGCTACGACTCAGACCATGAGTCGCATAAAAAACCCGAATCCACCCATGGATCCCCTAACAAGGGTATCACCACACCACCACCACGCAAGGTGGCCCTGAACTCACGTGACAAAATCCTATGCAAGCTTGTAGCGAAGACCAATATTTCCCAAAACACGAGGCTCTTTCGTTTCGCATTACCATCAGAGGACCAAGTCTTGGGTTTACGCGTGGGGAAGCACATTTTCATATACGCCACCATTGACCACAAGCTATGTATCCGAGCCTACACTCCAACAAGTAGCGTTGACGAAGTGGGGTTCTTTGAGCTTCTTATAAAGGTGTACTTCAAAGGAGAGCACCCCAAGTTCCCAAACGGAGGACTCATGTCCCAGTATTTGGACTCTCTCCCCATTGGGTCCGTGATTGACGTGAAAGGCCCATTGGGCCACATAGAGTACACCGGAAGAGGAAACTTTCTGGTTCACGGAAAACAAAGATCCGCGAAAAAGCTAGCCATGCTGGCTGGTGGGACCGGGATCACACCGATTTACCAAGTGGCACAAGCGATTTTGAAGGACCCACAAGACCGCACTGAAATGTACCTAGTGTATGCTAACCACACTGAGGATGATATATTGTTGAGAGAAGAGTTAGATGCGTGGGCGAAGACGCATTGTGACCGGTTCAAGGTTTGGTATGTGGTGGGAGTTGCGAAGGAAGGGTGGCGATACAGTGTGGGCCACATCACGGAGACTATCATGAGGGAGCACCTTCCGGAAACGTCGATGGATACCTTGGCGTTAACGTGTGGGCCACCACCCATGATTGATTTAGCGGTGAAGCCTAATTTGGAGAAGATGGGGTACGATGTTAAGAACGATCTACTTGTGTTTTAA 981 0.4944 MNNSWYRVKTNVAKPAKGEIGIVFEHPAQAGNQPGYDSDHESHKKPESTHGSPNKGITTPPPRKVALNSRDKILCKLVAKTNISQNTRLFRFALPSEDQVLGLRVGKHIFIYATIDHKLCIRAYTPTSSVDEVGFFELLIKVYFKGEHPKFPNGGLMSQYLDSLPIGSVIDVKGPLGHIEYTGRGNFLVHGKQRSAKKLAMLAGGTGITPIYQVAQAILKDPQDRTEMYLVYANHTEDDILLREELDAWAKTHCDRFKVWYVVGVAKEGWRYSVGHITETIMREHLPETSMDTLALTCGPPPMIDLAVKPNLEKMGYDVKNDLLVF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1603 326 Pfam Oxidoreductase FAD-binding domain 75 181 IPR008333 -
Aed3g1603 326 SUPERFAMILY Riboflavin synthase domain-like 63 182 IPR017938 -
Aed3g1603 326 Gene3D Translation factors 63 176 - -
Aed3g1603 326 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 200 219 IPR001709 GO:0016491
Aed3g1603 326 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 238 249 IPR001709 GO:0016491
Aed3g1603 326 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 122 129 IPR001709 GO:0016491
Aed3g1603 326 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 226 235 IPR001709 GO:0016491
Aed3g1603 326 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 270 286 IPR001709 GO:0016491
Aed3g1603 326 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 294 302 IPR001709 GO:0016491
Aed3g1603 326 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 163 IPR001709 GO:0016491
Aed3g1603 326 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 70 182 IPR017927 GO:0016491
Aed3g1603 326 Pfam Oxidoreductase NAD-binding domain 201 307 IPR001433 GO:0016491
Aed3g1603 326 CDD cyt_b5_reduct_like 75 321 - -
Aed3g1603 326 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 169 320 IPR039261 -
Aed3g1603 326 PANTHER NADH-CYTOCHROME B5 REDUCTASE 58 326 IPR001834 GO:0016491
Aed3g1603 326 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 59 IPR001834 GO:0016491
Aed3g1603 326 PANTHER NITRATE REDUCTASE 58 326 - -
Aed3g1603 326 PANTHER NITRATE REDUCTASE 1 59 - -
Aed3g1603 326 PRINTS Cytochrome B5 reductase signature 122 129 - -
Aed3g1603 326 PRINTS Cytochrome B5 reductase signature 167 181 - -
Aed3g1603 326 PRINTS Cytochrome B5 reductase signature 200 219 - -
Aed3g1603 326 PRINTS Cytochrome B5 reductase signature 294 302 - -
Aed3g1603 326 PRINTS Cytochrome B5 reductase signature 101 112 - -
Aed3g1603 326 PRINTS Cytochrome B5 reductase signature 238 249 - -
Aed3g1603 326 MobiDBLite consensus disorder prediction 28 63 - -
Aed3g1603 326 Gene3D - 177 326 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1603 Aed-Chr3 20590782 20592615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1603 57 317 NADPH P450 reductases AT5G17770 38.550 2.89e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1603 K10534 - gmx:100818642 496.123