Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1602 ATGGCAGCTAGCTACAAAAACGGCGTGGACCTTAAGCCGGCACTCACGTTGGATTCCTCAAGCAGCGACGAGGACGAAAACGATGACGCTTCATACCTGAAAGAGCTGAATCAGCTGATAAGAAAAGCGAATGCTGAAATGGAGGATTCGGTTCTGGACCCGCGCGAAGAGGGAATCCCAGACAAGTGGGTCGCACGGAACGCCTCGCTGGTGCGACTCACAGGGAAACACCCCTTCAACGCGGAGGCCCCACTCACGCGCCTCATGCAGTATGGCTTCATCACCCCGGCACCACTCCACTACGTCTGCAACCACGGTCCAGTCCCCCGAGCCAATCTGAAAGACTGGACCGTCGAAGTAACCGGTTTGGTCAAACGGCCAAACCGGTTCACAATGGAAAACTTCGTGAAGGATTTCCCACACCTCGAGTTTCCGGCTACGCTAGTATGCTCCGGGAACCGCCGCAAGGAGCTGAACATAATGAAGCAGACATCCGGCTCCAACATGACCGCCGGAGGAGCCTCCACCTCCCTGTGGCGCGGCGTCCCGCTGCGGCATGTGCTGCGGCGCTGCGGGATCCTCTCACGTGCGAATGGCGCGCTTCACGTGTGCTTCGAAGGCGCCGAGGATCTCCCCGGTGGCGGAGGGTCCAAGTACGGAACCAGCGTCTCCAGGGATCTCGCCATGGACCCCACGCGTGACGTCATCCTGGCGTACATGCAAAACGGTGAAGCCATTCCGCCGGATCACGGGTTCCCCATTCGCCTCATTATTCCGGGGTTCATCGGTGGAAGAATGGTGAAATGGCTACAACGCATTGTCGTTACTGAGCATGAGTCCGACAATCATTATCATTATAAGGATAACAAAGTCCTCCCTTCACACGTTGATGCAGATCTTGCCAATGAACAAGGTTGGTGGTATAAGCAGGAGTATATCGTAAACGAGTTGAGTATAAACTCAGTGATAACTACGCCTTCTCACCAAGAGATCTTGCCAATCAACTCATATACTATGCAGAATAAGCCTTATGAACTCAGAGGTTTCGCATATACCGGCGGTGGTAGAAAAGTGACACGTGTTGAGATAACATTGGACGGTGGTGAAACGTGGCACATGTGCACATTGGATCATACTGAGAAACCCAACAAATATGGTAAGTATTGGTGCTGGTGCTTCTGGTCTTTGGAGTTGGAGGTGATTGAACTGCTTGGGAACACAGAGATTGCGGTTCGGGCTTGGGATGAAGGCCTCAACACGCAACCTGAACACCTCAATTGGAATGTTATGGGAATGATGAACAACTCTTGGTATAGAGTGAAAACAAATGTGGCCAAGCCTGAGAAGGATGAGATAGGCATAGTGTTTGAACACCCTGCTCAAGCAGGAAACCAACCCGGTGGGTGGATGAATAAGGAAAAACATTTGGAAAAATCACTAGAGAAATTACCAACCCTCAAAAAGAGTGGTTACACCCCAGACAACTCTGTGCATGACAATTCCGAATCCACCAATTTGGGCCCTATAGAGGAGATCACAAAAACCCCACCACCATGCAAAGTGGCACTTAACTCACGTGACAAAATCCCATGCAAGCTTGTGTCAAAGACTCACATTTCCCACGACACAAGGCTCTTCCGTTTTGCATTGGCATTAGAGGACCAAGTCTTAGGTTTACCCGTGGGGAAGCACATTTTCCTGTACGCCACCATTGAGGACAAGTTATGCATACGAGCCTACACTCCAACAAGTAGCGTGGACGAAGTGGGGTTCTTTGAGCTTCTTATAAAGGTGTACTTCAAAGGAGAGAATCCGAAGTACCCAAAGGGAGGACTCATGTCCCAGCATTTGGACTCTCTCCCCATTGGGTCTGTGATTGACGCGAAAGGACCATTGGGCCACATAGAGTACACTGGAAGAGGCAACTTTCTTGTTCACGGAAAACAAAGATTTGCGAAAAAGCTAGCCATGCTGGCTGGTGGGACCGGGATCACACCGATTTACCAAGTGGCACAAGCGATTTTGAAGGACCCACAAGACCAAACTGAAATGCATTTGGTGTATGCTAACCACAGCGAGGATGATATATTGTTGAGGGAAGAGTTAGATGCGTGGGCGAAGACGCATTGTGACCGGTTCAAGGTGTGGTATGTGGTTGGAATTGTGAAGGAAGGGTGGCAATACAGTGTGGGACGCATCACGGAGAGTATCATGAGGGAGCATCTTCCAGAAACTTCGAGGGATTCATTGGCATTGGCGTGTGGGCCTCCACCCTTGATTGATTTAACAGTGAAGCCTAGTTTGGAGAAGATGGGGTATGATATCAAGAATGATCTTCTTGTGTTTTAG 2349 0.5036 MAASYKNGVDLKPALTLDSSSSDEDENDDASYLKELNQLIRKANAEMEDSVLDPREEGIPDKWVARNASLVRLTGKHPFNAEAPLTRLMQYGFITPAPLHYVCNHGPVPRANLKDWTVEVTGLVKRPNRFTMENFVKDFPHLEFPATLVCSGNRRKELNIMKQTSGSNMTAGGASTSLWRGVPLRHVLRRCGILSRANGALHVCFEGAEDLPGGGGSKYGTSVSRDLAMDPTRDVILAYMQNGEAIPPDHGFPIRLIIPGFIGGRMVKWLQRIVVTEHESDNHYHYKDNKVLPSHVDADLANEQGWWYKQEYIVNELSINSVITTPSHQEILPINSYTMQNKPYELRGFAYTGGGRKVTRVEITLDGGETWHMCTLDHTEKPNKYGKYWCWCFWSLELEVIELLGNTEIAVRAWDEGLNTQPEHLNWNVMGMMNNSWYRVKTNVAKPEKDEIGIVFEHPAQAGNQPGGWMNKEKHLEKSLEKLPTLKKSGYTPDNSVHDNSESTNLGPIEEITKTPPPCKVALNSRDKIPCKLVSKTHISHDTRLFRFALALEDQVLGLPVGKHIFLYATIEDKLCIRAYTPTSSVDEVGFFELLIKVYFKGENPKYPKGGLMSQHLDSLPIGSVIDAKGPLGHIEYTGRGNFLVHGKQRFAKKLAMLAGGTGITPIYQVAQAILKDPQDQTEMHLVYANHSEDDILLREELDAWAKTHCDRFKVWYVVGIVKEGWQYSVGRITESIMREHLPETSRDSLALACGPPPLIDLTVKPSLEKMGYDIKNDLLVF 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1602 782 SUPERFAMILY Riboflavin synthase domain-like 519 638 IPR017938 -
Aed3g1602 782 Gene3D Translation factors 519 632 - -
Aed3g1602 782 MobiDBLite consensus disorder prediction 489 510 - -
Aed3g1602 782 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 57 313 IPR036374 -
Aed3g1602 782 Pfam Mo-co oxidoreductase dimerisation domain 312 443 IPR005066 GO:0016491|GO:0030151
Aed3g1602 782 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 626 776 IPR039261 -
Aed3g1602 782 MobiDBLite consensus disorder prediction 489 511 - -
Aed3g1602 782 Pfam Oxidoreductase molybdopterin binding domain 105 284 IPR000572 -
Aed3g1602 782 Gene3D - 59 306 IPR036374 -
Aed3g1602 782 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 526 638 IPR017927 GO:0016491
Aed3g1602 782 Coils Coil 33 53 - -
Aed3g1602 782 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 694 705 IPR001709 GO:0016491
Aed3g1602 782 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 750 758 IPR001709 GO:0016491
Aed3g1602 782 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 726 742 IPR001709 GO:0016491
Aed3g1602 782 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 578 585 IPR001709 GO:0016491
Aed3g1602 782 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 656 675 IPR001709 GO:0016491
Aed3g1602 782 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 682 691 IPR001709 GO:0016491
Aed3g1602 782 CDD cyt_b5_reduct_like 531 777 - -
Aed3g1602 782 CDD eukary_NR_Moco 56 442 - -
Aed3g1602 782 SUPERFAMILY E set domains 316 444 IPR014756 -
Aed3g1602 782 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 122 157 IPR022407 GO:0043546
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 346 360 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 360 372 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 263 276 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 93 109 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 230 246 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 314 326 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 425 438 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 387 397 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 157 169 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 412 424 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 172 187 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 71 85 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 146 157 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Eukaryotic molybdopterin domain signature 247 260 IPR008335 GO:0016491
Aed3g1602 782 PRINTS Cytochrome B5 reductase signature 656 675 - -
Aed3g1602 782 PRINTS Cytochrome B5 reductase signature 578 585 - -
Aed3g1602 782 PRINTS Cytochrome B5 reductase signature 750 758 - -
Aed3g1602 782 PRINTS Cytochrome B5 reductase signature 557 568 - -
Aed3g1602 782 PRINTS Cytochrome B5 reductase signature 623 637 - -
Aed3g1602 782 PRINTS Cytochrome B5 reductase signature 694 705 - -
Aed3g1602 782 Gene3D - 316 490 - -
Aed3g1602 782 Pfam Oxidoreductase NAD-binding domain 657 763 IPR001433 GO:0016491
Aed3g1602 782 PANTHER NADH-CYTOCHROME B5 REDUCTASE 515 782 IPR001834 GO:0016491
Aed3g1602 782 PANTHER NADH-CYTOCHROME B5 REDUCTASE 31 493 IPR001834 GO:0016491
Aed3g1602 782 Pfam Oxidoreductase FAD-binding domain 531 637 IPR008333 -
Aed3g1602 782 PANTHER NITRATE REDUCTASE [NADH] 2 515 782 - -
Aed3g1602 782 PANTHER NITRATE REDUCTASE [NADH] 2 31 493 - -
Aed3g1602 782 MobiDBLite consensus disorder prediction 1 29 - -
Aed3g1602 782 Gene3D - 633 782 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1602 Aed-Chr3 20584171 20588337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1602 520 773 NADPH P450 reductases AT5G17770 37.647 1.67e-47 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1602 K10534 - gmx:100818642 855.514