Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1601 ATGGCGGCTTCCGTTCACAACCGTCAATACGGAAGCAGCAACAACATAAACGACGTCGTTGGCGGAAATATGCCGTTGCGTTTCGACTTGGACGCTTCCGACGACGAGGACGAAAACGACGATGCTTCGTATCTGAAAGAGCTGAATCTGCTGATACAGAAAGCAAATGCGGAAATGGAGGACTCGATTCTGGACCCTCGTCACGAGGGAACCGCGGATGAGTGGGTCGCACGAAACGCCTCCATGGTGCGTCTCACAGGGAAGTATCCCTTCAACGCGGAGGCTCCACTCCCGCGCCTCATGCACCATGGCTTCATTACTCCTTCCCCACTCCACTACGTCCGCAGCCACGGTCCGGTCTTCAAAGCGAAGAACTACGAAGAGTGGACCGTGGAAATAACCGGTTTGGTCAAACGACCAACCCGGTTCACCCTGGAGCAACTAATCCGGGAGTTCCCGCACCGCGAGTTCCCGGCGACGTTAGTCTGCGCCGGGAACCGCCGCAAGGAGCAGAACATGGTGAAGCAGAGTAACGGCTTCAACTGGGGCTGCGGCGGGACCTCCACCGCCCTGTGGCGCGGCGTCCCCCTCCGCCACGTGCTGCGCCGCTGCGGCATCCTCTCGCACTCCAGGGGAGCGCAGCACGTGTGCTTCGAGGGCGCCGAGGATCTCCCCGGGGGCGGCGGGTGCAAGTACGGAACCAGCGTCACGAGGGAGATCGCCATGGATCCTTCGCGTGACATCATCATCGCGTACATGCAAAACGGCGAGGAGATTGCGCCGGATCACGGGTTCCCCGTGCGCATGATTATTCCTGGGTTTATCGGTGGAAGGATGGTGAAGTGGCTGAAACGCATTGTCGTTAGTGAACACGAGTCCGAGAGTTATTACCATTATAAGGATAACAGAGTTCTCCCTTCTCAAGTTGACTCTGATCATGCCGATGCAGAAGGTTGGTGGTATAAGCCGGAGTATATCATAAACGAGTTGAACATAAACTCAGTGATAACGACGCCGTGTCACCAGGAGATCTTGCCCATCAACTCATGGACTACGCAGAGGCCTTATATACTCAGAGGCTACGCATACACCGGTGGTGGAAGAAAGCTGACACGTGTTGAAGTAACAGTGGACGGTGGAAAAACGTGGCGTGTGTGCGAATTGGAGCGTGCTGAGAAACCGAATAAATATGGCAAGTATTGGTGCTGGTGCTTCTGGTCTTTGGAGGTGGAGGTGATGGACCTGCTTGGGACCAAAGAAATTGCAGTTCGAGCTTGGGATGAAGGCCTCAACACCCAGCCTGAACACCTCATTTGGAATGTTATGGGCATGATGAACAATTGCTGGTTCAGAGTGAAAACAAATGTAGCAAAGCCCCATAAGGGTGAGATTGGCATAGTGTTTGAACACCCCACCCAACCAGCAAACCAACCCGGTGGTTGGATGGTAAAGGAAAAACATTTGGAGAAAACACTAGAGAAATTACCAACCCTCAAAAGGACTGGTTCAACACCATCCATGAACACATCCTCAAAGATGTTCACCATCTCTGAAATCAAAAAACACTGCACCTCTGACTCTACTTGGATCATCATCCATGGCCATGTCTACGACTGCACCCGCTTCCTCAAAGACCACCCCGGCGGCGTTGATAGCATCCTCATCAATGCCGGCACCGACTGCACCGAAGAGTTTGACGCCATCCATTCCGACAAAGCAAAGAAAATGCTTGAAGATTACCGAATTGGCGAACTCATGACCACAGGCTACACCTCAGACTCATCACCCAACAACTCCGTGCATGGGAATTCTGAATTCACAGCTCATTTGCCCCTTATAAAGGAAATCATCATAACACCACAACCACGCAACGTGGCACTTAAAACACGTGAGAAAATCTCATGCAAGCTCGTGTCAAAGAAATCGATTTCACACGACGTGAGGCTCTTCCGTTTTGCATTGCCCTCAGAGGACCAACTCTTGGGATTACCAGTGGGGAAACACATTTTCTTGTGTGCCACCATTAACGACAAGCTATGCATGCGAGCCTACACTCCAACAAGTAGCGTGGACGATGTAGGGTTCTTCGAACTACTCATCAAGGTGTACTTCAAAGGCGTGCATCCCAAGTTCCCAAACGGAGGACTCATGTCTCAGCATTTGGACTCTCAGCCCATTGGGTCTGTGTTGGACGTGAAAGGCCCATTGGGCCACATAGAGTACACCGGAAAAGGAAACTTCATGGTTCACGGAAAACAAAGATTCGCGAAAAAGCTAGCCATGTTGGCTGGGGGGACCGGGATCACACCAATTTACCAAGTGGCGCAAGCGATTCTGAAGGACCCAGAGGACCCCACCGAGATGCATGTAGTCTATGCGAACAAAACAGAGGATGATATTTTGTTGAAGGAAGAAATGGATGCGTGGGCGAAGAAACACGGTAACCGATTCAAGGTGTGGTACGTGGTGGAAACTCCCAAGGAAGGGTGGGGATACAGTGTGGGCTTCATCACGGAGAGTATCATGAGGGAGCATCTTCCAGAAGCGTCAAATGATGCCTTAGCTTTGACGTGTGGGCCACCACCCATGATTCAGTTCGCGGTGCAACCTAATTTGGAGAAGATGGGATACGATATCCAGAACGATTTACTTGTGTTTTAG 2661 0.5179 MAASVHNRQYGSSNNINDVVGGNMPLRFDLDASDDEDENDDASYLKELNLLIQKANAEMEDSILDPRHEGTADEWVARNASMVRLTGKYPFNAEAPLPRLMHHGFITPSPLHYVRSHGPVFKAKNYEEWTVEITGLVKRPTRFTLEQLIREFPHREFPATLVCAGNRRKEQNMVKQSNGFNWGCGGTSTALWRGVPLRHVLRRCGILSHSRGAQHVCFEGAEDLPGGGGCKYGTSVTREIAMDPSRDIIIAYMQNGEEIAPDHGFPVRMIIPGFIGGRMVKWLKRIVVSEHESESYYHYKDNRVLPSQVDSDHADAEGWWYKPEYIINELNINSVITTPCHQEILPINSWTTQRPYILRGYAYTGGGRKLTRVEVTVDGGKTWRVCELERAEKPNKYGKYWCWCFWSLEVEVMDLLGTKEIAVRAWDEGLNTQPEHLIWNVMGMMNNCWFRVKTNVAKPHKGEIGIVFEHPTQPANQPGGWMVKEKHLEKTLEKLPTLKRTGSTPSMNTSSKMFTISEIKKHCTSDSTWIIIHGHVYDCTRFLKDHPGGVDSILINAGTDCTEEFDAIHSDKAKKMLEDYRIGELMTTGYTSDSSPNNSVHGNSEFTAHLPLIKEIIITPQPRNVALKTREKISCKLVSKKSISHDVRLFRFALPSEDQLLGLPVGKHIFLCATINDKLCMRAYTPTSSVDDVGFFELLIKVYFKGVHPKFPNGGLMSQHLDSQPIGSVLDVKGPLGHIEYTGKGNFMVHGKQRFAKKLAMLAGGTGITPIYQVAQAILKDPEDPTEMHVVYANKTEDDILLKEEMDAWAKKHGNRFKVWYVVETPKEGWGYSVGFITESIMREHLPEASNDALALTCGPPPMIQFAVQPNLEKMGYDIQNDLLVF 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1601 886 Coils Coil 45 65 - -
Aed3g1601 886 CDD eukary_NR_Moco 69 454 - -
Aed3g1601 886 SUPERFAMILY E set domains 329 456 IPR014756 -
Aed3g1601 886 CDD cyt_b5_reduct_like 635 878 - -
Aed3g1601 886 Gene3D Translation factors 623 736 - -
Aed3g1601 886 PANTHER NITRATE REDUCTASE [NADH] 2 40 886 - -
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 83 97 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 399 409 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 260 273 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 185 200 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 276 289 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 105 121 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 372 384 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 243 259 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 159 170 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 170 182 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 327 339 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 424 436 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 437 450 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Eukaryotic molybdopterin domain signature 358 372 IPR008335 GO:0016491
Aed3g1601 886 PRINTS Cytochrome B5 reductase signature 682 689 - -
Aed3g1601 886 PRINTS Cytochrome B5 reductase signature 760 779 - -
Aed3g1601 886 PRINTS Cytochrome B5 reductase signature 854 862 - -
Aed3g1601 886 PRINTS Cytochrome B5 reductase signature 727 741 - -
Aed3g1601 886 PRINTS Cytochrome B5 reductase signature 798 809 - -
Aed3g1601 886 PRINTS Cytochrome B5 reductase signature 661 672 - -
Aed3g1601 886 Gene3D - 67 319 IPR036374 -
Aed3g1601 886 Pfam Cytochrome b5-like Heme/Steroid binding domain 516 585 IPR001199 -
Aed3g1601 886 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 511 586 IPR001199 -
Aed3g1601 886 Pfam Oxidoreductase molybdopterin binding domain 118 297 IPR000572 -
Aed3g1601 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 830 846 IPR001709 GO:0016491
Aed3g1601 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 786 795 IPR001709 GO:0016491
Aed3g1601 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 854 862 IPR001709 GO:0016491
Aed3g1601 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 545 555 IPR001709 GO:0016491
Aed3g1601 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 798 809 IPR001709 GO:0016491
Aed3g1601 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 682 689 IPR001709 GO:0016491
Aed3g1601 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 760 779 IPR001709 GO:0016491
Aed3g1601 886 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 135 170 IPR022407 GO:0043546
Aed3g1601 886 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 542 549 IPR018506 GO:0020037
Aed3g1601 886 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 729 880 IPR039261 -
Aed3g1601 886 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 630 742 IPR017927 GO:0016491
Aed3g1601 886 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 66 327 IPR036374 -
Aed3g1601 886 SUPERFAMILY Riboflavin synthase domain-like 622 743 IPR017938 -
Aed3g1601 886 PANTHER NADH-CYTOCHROME B5 REDUCTASE 40 886 IPR001834 GO:0016491
Aed3g1601 886 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 510 590 IPR036400 -
Aed3g1601 886 Gene3D - 737 881 IPR039261 -
Aed3g1601 886 PRINTS Cytochrome B5 signature 573 585 IPR001199 -
Aed3g1601 886 PRINTS Cytochrome B5 signature 536 546 IPR001199 -
Aed3g1601 886 PRINTS Cytochrome B5 signature 561 568 IPR001199 -
Aed3g1601 886 PRINTS Cytochrome B5 signature 546 560 IPR001199 -
Aed3g1601 886 Pfam Oxidoreductase FAD-binding domain 635 741 IPR008333 -
Aed3g1601 886 Gene3D - 329 503 - -
Aed3g1601 886 PIRSF Nitr_rd_NADH 2 885 IPR012137 GO:0006809|GO:0042128|GO:0050464
Aed3g1601 886 Pfam Oxidoreductase NAD-binding domain 761 868 IPR001433 GO:0016491
Aed3g1601 886 Gene3D - 506 587 IPR036400 -
Aed3g1601 886 Pfam Mo-co oxidoreductase dimerisation domain 325 455 IPR005066 GO:0016491|GO:0030151
Aed3g1601 886 SMART Cyt_b5_2 514 586 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1601 Aed-Chr3 20577476 20581507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1601 616 877 NADPH P450 reductases AT5G17770 40.530 1.11e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1601 K10534 - gmx:100818103 1635.54