Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1597 ATGAAATCCAAAACCGACGAGACCGTCTGCGGCGGGAGCAGCAGCTCTCCGAGTCCGCCTCCGTCGCCGCGGCGGAGCTCGGCAGGTCCGCGGTGCCGTCGGCGGGTGAAGCCGGCGAAGGACTCGTCGGAGAGCCGGCGTCTGGTGGCCGGAATCATGTCGCGGCGTGGCCTCCGGTACTTCTTCCTGCTGCCGGTGGTGTATATCTCGGGGCTGCTGATGTGCGTGGGCCCCTTCTCCGCCCTCATTGGCCACACTCCCCTCCCCGGCTCCCGCTACCGCAGCCACGAGATCTTCAACAACCTCTGGCGCGATATCGAGGCCGATAATTCTTCCACCGCCATCGAGTTGGATTCAGTGTGGAAGTATAAAAGAAAGTTGAGAGAGCAGAAGCCTTGTCCGAATTTGACGGCTTTGCACCACGAACATTTTGTTGCGGTTGCAGCCTGCAATTACTGGCTGATCAGCTGTTATGGCGGCTGCCACAACCAAGATGCTGCAGCTGCATCACTTTATGTGGTCTGTGATTTCAAACCCTATGAATTTGGGGATATATATGATGAAGATCATTTTATATCCACACTTGATGGTTATGTGAAGGTGGTCAAAGAACTGCCTGAGGCACTAATGGAGCGGCATAATTACAATATGACTAATATCACTAACATCAGAGTTCAAGCTTGGGCTCCTGTCAGTTATTACCTTGGAGTTGTTTCTCCTATCTTGCAAAAGGAAGGGGTAATTCGAATAGCTCCGTTTGCCAATCGTTTGGCAATGAGTGTCCCTCCACATATTCAATTTCTAAGATGTCTTACTAACTATAAAGCATTGAGGTTTTCTTCTTCAATATCTGCACTAGGTAAGAAATTAGTTCACCGAATGATTGAGAAGAGCTCAAGGACAGATGGAAAATACATTGCTGTGCATCTTCGTTTTGAGGAGGTACTGATGCTCATTCAAGTTTCAACTATGTTAGAACTGGATATGGTAGCATTCTCCTGTTGTGTATATGATGGAGGACGGGCAGAAAAGTTGGAAATGGATACAGTTCGAGAAAAAGGGTGGAGGGGAAAATTTAAAAGAAAAGACCGTATCATTTTACCTGACCTCAATCGGGTTGATGGAAAATGCCCACTAACCCCTCTAGAGGTTGGTATGATGCTGCGTGGCATGGGATTTGATAACAATACTTCAATATACTTAGCTTCTGGGAAAATATATCAGGCAGAGAGATATTTGGCTCCTTTGATAAAGATGTTCCCCAATCTTTACATGAAGGAGTCTCTTGCAACATCCGATGAGCTTGCTCCGTTTATGAGCTATTCCTCCCAATTGGCTGCACTGGACTACACAGTATGCTTGTCTAGTGAGGTTTTTGTAACAACTCAGGGTGGTAACTTCCCTCATTTTTTGATGGGCCATAGAAGATTCCTCTATGATGGCCATGCCAAGACAATTATACCAGATAAGCGCAAGCTTGTTGTTCTTTTGGATGACGTGAGTATTAGTTGGAGAGCTTTTAAGGATCAGATGGAAGACATGCTCAATGAAAGTGACCGCAAAGGAATCATGAAATGCAACATTTCAATGGATGAGAACCCTAACCTCTCACTCTCACTCCCTCGTGCCTCTTCCTCTTCCTCTCAGGAATTCCTCAAACAAGTCCAAGCTGCACTCAAGCGCCATCGCCCTCTCGGTACAGCGCAGTCACATAGCGTGAGGCCAAAGCGGTCCATGGTGGCTCTACGAAGAGCCGCCGCGAACAGGTCCGAAGAGGAAGCAGCGCCGTCGATTTCGGACACTTGCACCGCCGAACCCTGCAAAAACGAGCCCTCTTTGCAGGTCGAATCTCAAAGTGTTGCTGCACACAACAAGAAGGTTCAGTTTTCAACTCAGATCAACAACAACACTGCACAGCTACAGGATAAAGCCACTGAGTTGGAGAACATATCATCTCACATGGGTTCACTTGCATTGACAGATGATGAAGCAACGGTCGGATTCAATCAACACGTGAAGCATGAAAACATGCAACCGCCAGAATCTGAAACTAGTTTGGTATTCGAGGGAGGCAAGAGTTCTCTGCTGCCAAAGAGAACAATGGTTACTCAAGACCATCTGCAGCAATTCAAGAATTTTTTGAGGCAACCGGCTACACAATCTTCTGTAGCGGGATTGCCGTGTCCTACAACTACGTCAGTCCATTCAACTTCAGCTCCAATGCCAAATTCTATAACCCGTTGTTCTAATTCTTGTATAGATAGTGGTTCATGTGTGGCGGAACCTCATGGGAACCGGAATGTTAATCCTCATCCTATAACTCAAGGGACTGTTAAATCACCAAATAATTCCGTGAAAGGCTCCAATAGAATGTCAATTGATCAGGTGGCAAGTGCTGTCCAAGATTGTGATTCACTAATTGATGCAGAGTTGACATTTAAGCAGAGTGACCCAACTAAGGAGCAGCAAGGATGTATGTTAAAGGAAACAAGTATTTCAAAACATACCTCTTGTCGTGGTGACATGTTAAGTAAAGGGGAAGAGTCTGCAGCTGTTACCAACATGCAGCCTCAGGTTCCCACTTCATCTGCAGATGTGAAGTTGGAGTCTTCTAAGTTAGAAAAGCAAGAGAAAAATGCAAGTTCTAAAGCATCATCGGGTGTTCGAAAGAGGGCCTATGACCCTGAACTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATTTCATCTGACTGTACAATCTATGCACTTAAAAAGATAAAACTAAAGGGTCGTGATTATGCCACTGCATATGGCTTTTGTCAAGAGATCGAGTATCTAAATAAGCTGAAAGGAATGAATAATATTATCCAGCTTATAGATTATGAGGTGACAGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAATAAGGAAGGTAGAGTCAAGAATGATGGATATATATACATGGTACTTGAATATGGGGAAATCGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTGGATGGAAACAACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGGTTGGTACTCTAAGTTACATGTCACCAGAAGCATTTATGTGCAATGAGAGTGATGCAAGTGGAAACATCATAAAATGTGGTCGGCCATCAGATATCTGGTCCCTTGGCTGCATTCTTTATCAAATGGTTTATGGGAGAACACCCTTTGCAGATTACAAGACATTCTGGGCAAAATTCAAAGTTATAACTGATCCAAATCATGAAATTACATTCGAACCAGTTTCAAATCCATGGCTTATGGATCTTATGAAAAGGTGTTTAGCATGGGATCGCAACGAAAGGTGGAGAATTCCTCAGCTGCTCCAGCATCCTTTTCTAGTTCCCCCTGTTCCATGCCATTCATCTCTGCCCAAAGACCAAACCTTTAAATTGCTGCAACTTGTATCTGAAACTTGCATAAATGACCCAGAATCATCGCAGCTCTGTTGTCAGCTCCAACAGGTGCTTGGTAATCCCATCAAGTTAACAAGTATTCATTCATTAAATTCGCTAGACCAACAGTGTAAATTGTTATCCCGAGTATCAGAACTCTGTATTCAGCTACAAGAACGATTGAGAAAGACTGATAAACAGTAG 3693 0.4471 MKSKTDETVCGGSSSSPSPPPSPRRSSAGPRCRRRVKPAKDSSESRRLVAGIMSRRGLRYFFLLPVVYISGLLMCVGPFSALIGHTPLPGSRYRSHEIFNNLWRDIEADNSSTAIELDSVWKYKRKLREQKPCPNLTALHHEHFVAVAACNYWLISCYGGCHNQDAAAASLYVVCDFKPYEFGDIYDEDHFISTLDGYVKVVKELPEALMERHNYNMTNITNIRVQAWAPVSYYLGVVSPILQKEGVIRIAPFANRLAMSVPPHIQFLRCLTNYKALRFSSSISALGKKLVHRMIEKSSRTDGKYIAVHLRFEEVLMLIQVSTMLELDMVAFSCCVYDGGRAEKLEMDTVREKGWRGKFKRKDRIILPDLNRVDGKCPLTPLEVGMMLRGMGFDNNTSIYLASGKIYQAERYLAPLIKMFPNLYMKESLATSDELAPFMSYSSQLAALDYTVCLSSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTIIPDKRKLVVLLDDVSISWRAFKDQMEDMLNESDRKGIMKCNISMDENPNLSLSLPRASSSSSQEFLKQVQAALKRHRPLGTAQSHSVRPKRSMVALRRAAANRSEEEAAPSISDTCTAEPCKNEPSLQVESQSVAAHNKKVQFSTQINNNTAQLQDKATELENISSHMGSLALTDDEATVGFNQHVKHENMQPPESETSLVFEGGKSSLLPKRTMVTQDHLQQFKNFLRQPATQSSVAGLPCPTTTSVHSTSAPMPNSITRCSNSCIDSGSCVAEPHGNRNVNPHPITQGTVKSPNNSVKGSNRMSIDQVASAVQDCDSLIDAELTFKQSDPTKEQQGCMLKETSISKHTSCRGDMLSKGEESAAVTNMQPQVPTSSADVKLESSKLEKQEKNASSKASSGVRKRAYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNKLKGMNNIIQLIDYEVTDKALFEGVINGSFSNKEGRVKNDGYIYMVLEYGEIDLAHMLSQKWKELDGNNQTIDENWLRFYWQVGTLSYMSPEAFMCNESDASGNIIKCGRPSDIWSLGCILYQMVYGRTPFADYKTFWAKFKVITDPNHEITFEPVSNPWLMDLMKRCLAWDRNERWRIPQLLQHPFLVPPVPCHSSLPKDQTFKLLQLVSETCINDPESSQLCCQLQQVLGNPIKLTSIHSLNSLDQQCKLLSRVSELCIQLQERLRKTDKQ 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1597 1230 Pfam GDP-fucose protein O-fucosyltransferase 180 477 IPR019378 -
Aed3g1597 1230 Pfam Protein kinase domain 1039 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1597 1230 Pfam Protein kinase domain 906 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1597 1230 MobiDBLite consensus disorder prediction 1 15 - -
Aed3g1597 1230 PANTHER O-FUCOSYLTRANSFERASE 10-RELATED 15 549 - -
Aed3g1597 1230 MobiDBLite consensus disorder prediction 836 887 - -
Aed3g1597 1230 PANTHER - 15 549 IPR024709 -
Aed3g1597 1230 SUPERFAMILY Protein kinase-like (PK-like) 900 1147 IPR011009 -
Aed3g1597 1230 MobiDBLite consensus disorder prediction 768 787 - -
Aed3g1597 1230 Gene3D Phosphorylase Kinase; domain 1 899 984 - -
Aed3g1597 1230 CDD O-FucT_plant 152 485 IPR024709 -
Aed3g1597 1230 Gene3D Transferase(Phosphotransferase) domain 1 1006 1148 - -
Aed3g1597 1230 MobiDBLite consensus disorder prediction 766 787 - -
Aed3g1597 1230 SMART serkin_6 906 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1597 1230 MobiDBLite consensus disorder prediction 849 867 - -
Aed3g1597 1230 MobiDBLite consensus disorder prediction 1 44 - -
Aed3g1597 1230 ProSitePatterns Protein kinases ATP-binding region signature. 912 934 IPR017441 GO:0005524
Aed3g1597 1230 MobiDBLite consensus disorder prediction 587 606 - -
Aed3g1597 1230 ProSiteProfiles Protein kinase domain profile. 906 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1597 Aed-Chr3 20490996 20502879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1597 181 517 Miscellaneous Gene Families AT1G22460 37.870 2.28e-61 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Aed3g1597 O-FucT 6.1e-47 CL0113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1597 - K08866 gmx:100795003 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1597 3 20490996 20502879 Aed3g1597 3 20490996 20502879 ECH