Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1581 ATGGAGAGAGCGTTGCAGTGGATTCTGGTTCTAGCAGTATGTGCTTCATCAATCATTATTGATGCTGCGGAAATGGATGAACCTGCAAATAGGAAGCTTGCTGATGTTGATTATTCAGATGTGATAAGCATCGATTGTGGGGTAACTGAGGGCTACACCGACACAACCCGCATACAGTATCAAGATGATGATATCCAATTTGGTGAAATCCACACCATATCCTCCAATAACAGCTTGAATTACCAACCCCAAATCCTGAACCAGCTCATCACACTAAGAAGCTTCCCAGAAGGGAAGAGAAACTGCTACACCTTGAAACCAAAGCAGGGAAAGAACAACAGATACATCGTGAGGAGTTACTACGCATATGGAAACTACGACAACAGAAACAAGCCCCCAACTTTCGATTTGTACATTGATGTCACAAAGTTCACGTTCATGCGCTTCACTGTGGTGGAAGCCACTCGTCGAGTTGAGGCTATTTATTTTAGCTTAACGGACACGATTGATTTCTGCCTAGTGAATGTTGATCAAGGGGTTCCTTTCGTTTCGCTGCTGGAGTTGTGGCCTTTGGAGAATGGTGCCACTGTTTATGAGGGTTCGTTGGATTTACGGACGCTGGACCTACTCACTAGGGCCACGCTTGGCGTGTCTACGGATCAGGACGAACACTTGCTCAGGTATGTTGGTGACAAATATGGCAGGTCTTGGCTTGTAAGAATAGTAACACGCAACGAGAAAGAAATGAAGACACCATTAGCTATCGATTTGGAGAAACTAAACGATCCTTACAAACTGCCGATAGATGTTTTGAACACTGCAGTGAGCGCGCTGAGGTTATCGGATTCGGTGAATATATGGAGGATTTACAATGACACGAGTGTTGAGTACAAAGTGTACCTTCATTTTTTCGACTTTGAGGAAAGGGAAAATAGTAGTCAGAAAAGGGTAATGAATATTATTGTTAATGGAATCAACAATGTTCCTGTTAATGAGAATGTCACCCTTTTGTACCGGGAGCCCCAGACGGTGGCACTTTCTATAAAACAAGGGATGGGGATTAATAATATTTTCATTAAAGCTACCCCTGAATCTCACTTACCTGCGATGCTTAATGCTTATGAGATTTATAGAGTGGTGCCTCACTCTATTTCAGCCACTCAACAAGATGATGGGACGATATCTCGAACTCCAAATAAAGAGCAGCTAAAATTGAAAAGCCAAGCATTTTCTCACTCAGATCTTCATAGTATCACTGATGGTTTCAAAACAATGATTGGAAAAGGTGGATTTGGTGAGGTTTATCTTGGTACTCTACAGAGTGGCGAAAGAGTTGCTGTAAAGACACTTTCTTTATCATCAAATCAAGGCTATAAGGAGTTTAAGTCAGAGGCAAAATTCTTGACGCTTGTTCATCATAGAAATGTGGTTTCTCTTGTGGGGTATTGTGACGAAGATGACACTAAAGCACTAATTTACGAATATCTCCCTAAAGGAAACCTCCAAGAACAATTGTCAGATAAAAGCCCAACTGTCTTGGGATGGAATAACAGACTTCAAATTGCCTTAGATGCAGCAAATGGATTGGATTATCTGCATAATGGATGCAAGCCACCTATAATTCATAGAGATTTGAAAGGTTCCAACATCTTACTAGATGAAAACCTGCATGCCAAGATTTCAGACTTTGGACTGTCTAGAACTTTTGCAAATGACAATGACACTCATGTCTTAACTAATTACCCAGCTGGCACACCAGGTTACCTTGATCCTGAGTATCACTCATCAGGGACTCTCAACAAAAGGAGTGATGTTTACAGTTTTGGGATAGTTTTGCTAGAGCTAATAACTGGTCAACCAGCAATAATAAGAGGAACAACTCCTAATAACAAACCAAGTCACATACATTCTTGGGTGAAACACAAACTTGAAAATGGAGACATCCATGCAATAGTTGATCCAAGGCTAAGTGGAAATTACCATGTTGCTTCAGCTTGGAAATTCTTAGAAATAGCCATGTCATGCCTTCCTGATGTTGCCATCCAAAGGCCTGACATAAGCCACATAACCTCAGAACTAAAGGATTCTTTGTCTCTTGAAATGTCCCTTCAAAGGAGTAATGGGAGCAATGAGAGAGAATATTTATTCCTCATGGACTCTGTGCAAATTGATTTTAATGACTCGGATATAGGTCCAATTCCTAGGTAG 2208 0.4117 MERALQWILVLAVCASSIIIDAAEMDEPANRKLADVDYSDVISIDCGVTEGYTDTTRIQYQDDDIQFGEIHTISSNNSLNYQPQILNQLITLRSFPEGKRNCYTLKPKQGKNNRYIVRSYYAYGNYDNRNKPPTFDLYIDVTKFTFMRFTVVEATRRVEAIYFSLTDTIDFCLVNVDQGVPFVSLLELWPLENGATVYEGSLDLRTLDLLTRATLGVSTDQDEHLLRYVGDKYGRSWLVRIVTRNEKEMKTPLAIDLEKLNDPYKLPIDVLNTAVSALRLSDSVNIWRIYNDTSVEYKVYLHFFDFEERENSSQKRVMNIIVNGINNVPVNENVTLLYREPQTVALSIKQGMGINNIFIKATPESHLPAMLNAYEIYRVVPHSISATQQDDGTISRTPNKEQLKLKSQAFSHSDLHSITDGFKTMIGKGGFGEVYLGTLQSGERVAVKTLSLSSNQGYKEFKSEAKFLTLVHHRNVVSLVGYCDEDDTKALIYEYLPKGNLQEQLSDKSPTVLGWNNRLQIALDAANGLDYLHNGCKPPIIHRDLKGSNILLDENLHAKISDFGLSRTFANDNDTHVLTNYPAGTPGYLDPEYHSSGTLNKRSDVYSFGIVLLELITGQPAIIRGTTPNNKPSHIHSWVKHKLENGDIHAIVDPRLSGNYHVASAWKFLEIAMSCLPDVAIQRPDISHITSELKDSLSLEMSLQRSNGSNEREYLFLMDSVQIDFNDSDIGPIPR 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1581 735 ProSitePatterns Protein kinases ATP-binding region signature. 426 448 IPR017441 GO:0005524
Aed3g1581 735 Pfam Malectin-like domain 44 379 IPR024788 -
Aed3g1581 735 SMART serkin_6 420 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1581 735 CDD STKc_IRAK 426 694 - -
Aed3g1581 735 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 400 713 - -
Aed3g1581 735 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 37 392 - -
Aed3g1581 735 Gene3D Phosphorylase Kinase; domain 1 402 495 - -
Aed3g1581 735 PANTHER OS07G0107800 PROTEIN-RELATED 400 713 - -
Aed3g1581 735 PANTHER OS07G0107800 PROTEIN-RELATED 37 392 - -
Aed3g1581 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Aed3g1581 735 Gene3D Transferase(Phosphotransferase) domain 1 496 715 - -
Aed3g1581 735 SUPERFAMILY Protein kinase-like (PK-like) 404 691 IPR011009 -
Aed3g1581 735 Pfam Protein tyrosine and serine/threonine kinase 423 690 IPR001245 GO:0004672|GO:0006468
Aed3g1581 735 ProSiteProfiles Protein kinase domain profile. 420 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1581 Aed-Chr3 20256864 20266489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1581 406 735 Receptor kinase-like Gene Family AT1G51890 48.795 3.84e-102 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aed3g1581 Malectin_like 1.5e-65 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1581 - - vun:114194066 563.918