Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1579 ATGGCGAGTCCTAATTCGACATGTCCACCACCAATGAAGGCCACCTCCAATGGAGCATTCCAACATGAAAATCCCTTAGATTATGCGCTTCCCCTATTGATCCTCCAAATATGTGTGGTTGTGACCTTTACCAGATTCCTTGCATATCTTTGCAAACCTCTAAGACAACCCAGAGTTATTGCAGAGGTCATTGGAGGAATACTACTAGGACCATCTGCAATTGGAAGGAGTGAAAAATTCTTGAACACAATTTTCCCCAAAAAAAGCCTAACCGTGCTTGATACTGTGGCCAACATTGGCCTTCTATTCTTCTTGTTTTTGGTGGGTCTTGAGCTAGACTTGCGTTCTATACGCAAAACTGGCCACAAGGCCTTATTCATTGCCATTGCAGGCATCACATTCCCCTTTGTGCTTGGCATTGGCACATCATATGCACTTCGAGCCACCATCTCAAAGAATGTGAATCCAACCTCCTTCCTTGTCTTCATGGGCGTTGCTCTCTCAATCACCGCCTTCCCTGTCCTCGCGCGAATCCTCGCCGAGCTCAAACTCCTCACAACCGATGTTGGTCGCATAGCAATGTCAGCAGCCGCCATCAACGATGTTGCAGCATGGATACTACTTGCTCTTGCAATAGCACTTTCTGGCTCCAACACATGCCCACTTGTTTCCTTGTGGGTCATACTTTGTGCTGCTGGTTTTGTCCTCTTTGCCATGTTTGCCATAAGACCGTTGCTTGAACTAATGGCCAAGCGTTCCCCTGAGGGAGAGCCTGTGCAGGAGATCTACATATGCATCACTTTGACACTCGTCCTCGCTTGCAGCCTCGTCACCGATACCATTGGCATTCATGCACTCTTTGGAGCCTTTGTTGTTGGCATTGTTATGCCTAAGGATGGTCCCTTTGCTGGGGTTTTGACTGAGAAGATTGAGGACCTTGTAATGAGCCTCTTCTTGCCTCTCTATTTTGTGTCGAGTGGTTTGAAGACCGATGTGACAAGTATAAGTGGAGCACTTTCTTGGGGTATGCTTGTGCTTGTTATCTTCACTGCTTGCTTTGGAAAGATCGTTGGCACTTTCCTTGTGTCACTGTTGTGTAAGGTGCCTTTCAGAGAATCACTAGCCCTTGGATTTCTCATGAACACTAAAGGCTTGGTTGAGCTCATTGTGCTGAACGACCAAGCATTTGCAATATGTGTATTAATGGCATTGTTCACCACTTTCATCACCACCCCAATAGTGATGGCAGTGTACAAACCAGCACGGAGGGGATTACCCTACACGCACAAAACATGTCTACGCAAGGATCCCGACACAGAGCTAAGAGTGCTGGCGTGTTTCCACAGCACCCGCAACATCCCCACATTAATCAACCTAATAGAGTCATCCCGTGGAACCCGAAAGAGGGGGAAGCTCTGCGTCTACGCCATGCACCTGATGGAGCTCTCGGAGCGGCCATCAGCCATCACAATGGTCCACACGGCGCGCAACAACGGCATGCCTTTCTGGAACAAAAAGCACGACAACAGAGACCAGGTGGTCATCGCGTTTCAGGCGTACGGCCATCTAAGTAGCGTCAACGTCCGCCCCATGACGGCGATATCCGCCTTCAGCAACATCCACGAAGACATCTGCACCAGCGCTCACCAGAAGAGAGCGGCTATCATCTTCCTTCCGTTCCACAAACACCAGCGCCTCGACGGGACGATGGAGTCGGTGGGAAACTCGCTGAGAGCGATGAACGGCCTCGTTCTCACGCACGCTCCGTGTTCCGTGGGGATCCTCGTCGACCGCGGCCTCGGTGGGACAAGCCAGGTCCAGGCGAGCGACGTGTCGTACAAGGTTGTGGTGTTGTTCTTTGGAGGACGCGACGACCGGGAGGCGCTTGCCTACGGGATGAGAATGGCCGAGCACCCCGGCGTCTCCCTCACCGTCGTGAAGTTCGTTGTGCCGGCCGGGATGACGCTGGCCTTCGGCGCCAAACTGGTCGGCGTAACGGCGGACAAGAGAAAAAAAGTGATTATAAAAGCTAATGAAAACACTACAAACGACGAGGAGAAGGTCGAGGATGATCACTTCTGGTTGGAGTTCTTAGCCGTGTGCTGCAAGAATGCGGAGTCGATGATGTACGAGGAAAGATTAGTGGAAAGAAAAGAAGAAGTTGAGGCAACGTTGCGAGAGAAGAACAAGACCAATCTGATTTTGGTGGGTAGAATGCCGCAAGTGGCACCTTTGGTGAACACGAGTGATTGCCCTGAACTTGGTCCTGTTGGAAGCTACTTGGCTTCTTCTGAGTTCTCCAATTCTGCATCGGTTATAGTGTTTCAACAATACAATCCCAAAACTGATGTTGATCCGTTGGTTATGGAGGTTTCGGATTACATGAATATGCCAGACACACCAACACGTTGTGGTTCTCCATTGTAG 2427 0.5014 MASPNSTCPPPMKATSNGAFQHENPLDYALPLLILQICVVVTFTRFLAYLCKPLRQPRVIAEVIGGILLGPSAIGRSEKFLNTIFPKKSLTVLDTVANIGLLFFLFLVGLELDLRSIRKTGHKALFIAIAGITFPFVLGIGTSYALRATISKNVNPTSFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAINDVAAWILLALAIALSGSNTCPLVSLWVILCAAGFVLFAMFAIRPLLELMAKRSPEGEPVQEIYICITLTLVLACSLVTDTIGIHALFGAFVVGIVMPKDGPFAGVLTEKIEDLVMSLFLPLYFVSSGLKTDVTSISGALSWGMLVLVIFTACFGKIVGTFLVSLLCKVPFRESLALGFLMNTKGLVELIVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGLPYTHKTCLRKDPDTELRVLACFHSTRNIPTLINLIESSRGTRKRGKLCVYAMHLMELSERPSAITMVHTARNNGMPFWNKKHDNRDQVVIAFQAYGHLSSVNVRPMTAISAFSNIHEDICTSAHQKRAAIIFLPFHKHQRLDGTMESVGNSLRAMNGLVLTHAPCSVGILVDRGLGGTSQVQASDVSYKVVVLFFGGRDDREALAYGMRMAEHPGVSLTVVKFVVPAGMTLAFGAKLVGVTADKRKKVIIKANENTTNDEEKVEDDHFWLEFLAVCCKNAESMMYEERLVERKEEVEATLREKNKTNLILVGRMPQVAPLVNTSDCPELGPVGSYLASSEFSNSASVIVFQQYNPKTDVDPLVMEVSDYMNMPDTPTRCGSPL 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1579 808 Pfam Sodium/hydrogen exchanger family 39 412 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed3g1579 808 Coils Coil 711 731 - -
Aed3g1579 808 PANTHER CATION/H + ANTIPORTER 1 801 - -
Aed3g1579 808 Gene3D - 32 424 IPR038770 -
Aed3g1579 808 PANTHER CATION/H+ EXCHANGER 3 1 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1579 Aed-Chr3 20233049 20236325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1579 1 794 Antiporter Super Family AT3G17630 68.696 0.0 1081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1579 - - gmx:100818975 1410.2