Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1576 ATGGAGTGTTTTAAGAGAGTGTATGAGTGGCTATGCAATGCAAAATTATATTTGATAATATTGAGCTTGCAATTTGGCTCAGCTGGGATGTACCTTATCACCATGGATGCTCTCAACAAGGGCATGAGTCATTATGTTTTTGTCGTTTACCGCAATGTCATCGCCACTATAGTTCTTGCTCCATTCGCATTTTTTCTTGAAAGGAAAGTTAGGCCCAAGATGACACGTCGGATATTTTCAGAGATTATGGCAGTGGCTTTTGTCGAGATAATACTTGATCAATGCTTCACGTTCTTGGGTATGAAGTACACATCAGCATCATTTGCCTCTGCTGTGATGAATTCCGTACCCTCCATTACCTTTGTACTAGCAATCATTTTTCGATTGGAGTGCATGAACATTAAGGAGGTAGGATGTATAGCGAAAGTGATTGGAACTGCAGTTAGTCTTGGAGGTGCTTTTCTAATGGCACTGTACAAAGGTCCACTTGTTAAAATTGCAGCCTCATCATCATCCAGCCAGCCTGAGAATGTGAACGATCCCTCTGGCAATCACTGGCTCATTGGTGCTTGTTTTCTCCTCATTGGTTGTGCTGGCTTCGCTGCTTTCTACATTTTGCAAACCATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCTGCCTGGGTTTGTTTTGTGGGTGCAATTCAAAGCAGCGCAGTTACTCTTTTCATGGAACGCAAGAGCTCTCATGTCTGGTCTCTAGCATGGGATTCTAAGCTTGCTGCTTATGCATACTCGGGAATAGTAACGTCAGCAATCCAATTTTATGTGCAAGGCATGGTTATTAAAGCCACTGGGCCAGTGTTTGTGACTGCATTTAATCCACTGCGTATGATCATAGTCACGGGCTTGGCCTTCATTGTTCTCGCTGAGAAACTCCACCTTGGAAGCATTATTGGAGGAGTGGTGGTGGTAATTGGGCTCTATCTTGTTGTGTGGGGCAAAGCTAAGGAGCAGAAACGTTTGTTGATGCCACCATCCCCTGAAAAAGTCACCCTGCAACGCCAACAACAGCTACCAGTTACTGTACCCATAATAAGTGATGATGATAACAAAGCTCAATTGGTCATAATTGGAGATAAAAACAAAGACATGGAAGCCAGAACATGA 1155 0.4338 MECFKRVYEWLCNAKLYLIILSLQFGSAGMYLITMDALNKGMSHYVFVVYRNVIATIVLAPFAFFLERKVRPKMTRRIFSEIMAVAFVEIILDQCFTFLGMKYTSASFASAVMNSVPSITFVLAIIFRLECMNIKEVGCIAKVIGTAVSLGGAFLMALYKGPLVKIAASSSSSQPENVNDPSGNHWLIGACFLLIGCAGFAAFYILQTITLRKYPAEMSLAAWVCFVGAIQSSAVTLFMERKSSHVWSLAWDSKLAAYAYSGIVTSAIQFYVQGMVIKATGPVFVTAFNPLRMIIVTGLAFIVLAEKLHLGSIIGGVVVVIGLYLVVWGKAKEQKRLLMPPSPEKVTLQRQQQLPVTVPIISDDDNKAQLVIIGDKNKDMEART 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1576 384 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Aed3g1576 384 Pfam EamA-like transporter family 27 156 IPR000620 GO:0016020|GO:0016021
Aed3g1576 384 PANTHER WAT1-RELATED PROTEIN 11 362 - -
Aed3g1576 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 332 - -
Aed3g1576 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Aed3g1576 384 PANTHER WAT1-RELATED PROTEIN 11 362 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1576 Aed-Chr3 20194797 20200591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1576 15 357 Nodulin-like Gene Family AT1G44800 47.384 1.95e-111 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1576 - - gmx:100813852 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1576 3 20194797 20200591 Aed3g1576 3 20194797 20200591 ECH