Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1575 ATGGAGGATCAAAATGCATCATCTAGTTCTAGTGGATTTGGCAAGATGTTCCACAAGGTTAAGCCCTACCTTGCAATGGTGTCCCTTCAGTTTGGTTACTCCGGAATGTACATCATCACCATGGTTTCTTTCAAGCATGGCATGAGCCATTGGGTTCTCTCTGTTTACCGTCATATAGTTGCCACCCTTATCATGGCCCCTTTTGCATTTTTCCTTGAAAGAAAAATAAGGCCAAAGATGACTCTACCGGTGTTCCTTAGGCTAGCAGCTCTCGGTTTCCTTGAGCCAGTGCTTGATCAAAACTTGTACAACATGGGAATGAAGAACACCTCAACAACGTTTGCATCAGCCACCGTTAATGTTCTCCCAGCCATTACTTTTATAATGGCACTTGTTTGCAGGTTAGAAACGGTGAACCTGAGGAAAGTACACAGTATGGCGAAGGTGATTGGAACAGCAGTAACAGTTTCAGGAGCAATGATTATGACTTTGTACAAAGGTCCGGCTCTTCAGTTCATAAAGGGGCAATCATCAGCAGCAACAAGCCACCATGAAAGTGGCACACATCCCTCTGAACAACACTGGGTCACTGGCACAATAGAGCTCCTTGCAAGTTGTGGTGGCTGGGCTAGCTTCTTTATCTTGCAATCATTCACTTTGAAGATGTATCCAGCAGAGCTCTCAGTCACAGCTTGGATTTGCTTTTTGGGCATTTTTGAGGGTGCAATTGCAACCCTTATATTCGAACGTGACATGAGTGTGTGGTCAATAGGCATGGACTCAAGGCTCCTTGCATGTGTTTATTCAGGTGTGGTGTGCTCTGGAATGGCATACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCTGTTTTTGTGACTTCTTTCAGCCCTCTGTCAAAATCATCTGCTGCAGGATCAGACATTTTTGACAGCATTGAGATCAATGTTCCTTCTGGGGCAGGGAAAAATGTGCTGCTTCCATCACCAAGAACAACATAA 1002 0.4491 MEDQNASSSSSGFGKMFHKVKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWVLSVYRHIVATLIMAPFAFFLERKIRPKMTLPVFLRLAALGFLEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFIMALVCRLETVNLRKVHSMAKVIGTAVTVSGAMIMTLYKGPALQFIKGQSSAATSHHESGTHPSEQHWVTGTIELLASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGAIATLIFERDMSVWSIGMDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLSKSSAAGSDIFDSIEINVPSGAGKNVLLPSPRTT 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1575 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 165 - -
Aed3g1575 333 Pfam MMPL family 117 185 IPR004869 GO:0016020
Aed3g1575 333 Pfam EamA-like transporter family 34 154 IPR000620 GO:0016020|GO:0016021
Aed3g1575 333 PANTHER WAT1-RELATED PROTEIN 16 301 IPR030184 GO:0016021|GO:0022857
Aed3g1575 333 PANTHER WAT1-RELATED PROTEIN 16 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1575 Aed-Chr3 20177986 20182549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1575 14 299 Nodulin-like Gene Family AT4G08300 65.862 6.04e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1575 - - gmx:100814921 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1575 3 20177986 20182549 Aed3g1575 3 20177986 20182549 ECH