Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1545 ATGGAAGTAATGTGTGGTGCCAAAGTTGAGAACATGGTCCACAAGGCGAAGCCATATGTGCTGACTGTGGGGTTGCAATTTGGGATGGCTGGGACTTACCTCTTCACCATGGCTAGCTTGAACCATGGAATGAGTCGTTTGGTGTTTATTGTGTATCGCAATGCCATTGCTGCATTGGCTCTTGCTCCCTTTGCTTTGATCTTTGAAAGGCCAGTGGTTGACCAAGGGTTCACTTTTTTGGGGATGCAATACACTTCGGCTTCCTTTGCATCTGCTGTTATGAATGCTGTTCCCTCTGTAACCTTTGTGCTTGCAGTAATTCTCAGGTTAGAGCGTATAAGAATAAGGGAACTACGCAGTCAAGCAAAAGTACTGGGAACCTTAGTAACTTTTGTTGGTGCTTTGTTAATGACACTATACAAAGGTCCTCAATTTGACCTATTTCACCATTCAAACACAACCCACCAGCAAGGTGGAACCAACTCCACTCAGAATCACTCTCACTGGTCCATAACGGTGAAAAGGTACCCAGCAGAACTATCACTGTCATCGTTGATATGTTTGGGAGGTGCTTTGCAAAGTGCAGTGGTTGCTTTGATTGCTGATCGCAACCCTCGAGCATGGGCTATTGGTTTCGATTACACCCTCTATGGCCCTCTTTACACTGGAATAATGAGTTCTGGAATAGCATATTATATACAAGGGTTGGTAATGCAAAGCAGAGGTCCAGTGTTTGTAACATCCTTCAATCCTCTTTGCATGATCATTGTTACTGCTTTGGGTTCCTTCCTTCTAGGAGAACACCTCTACCTCGGAAGCATCATTGGAGGCATCATTATCGCGGTGGGACTATACTCTGTGGTGTGGGGTAAAGGCAAAGACTACGTAGATGACACGTCATCATCACCACTAGCAACAACAAAAGAAACAGAAACAATGCAGCTTCCAATTACCTCACCAAATAATAACAGTAAATAA 978 0.4417 MEVMCGAKVENMVHKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRLVFIVYRNAIAALALAPFALIFERPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVILRLERIRIRELRSQAKVLGTLVTFVGALLMTLYKGPQFDLFHHSNTTHQQGGTNSTQNHSHWSITVKRYPAELSLSSLICLGGALQSAVVALIADRNPRAWAIGFDYTLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSFLLGEHLYLGSIIGGIIIAVGLYSVVWGKGKDYVDDTSSSPLATTKETETMQLPITSPNNNSK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1545 325 PANTHER WAT1-RELATED PROTEIN 170 313 IPR030184 GO:0016021|GO:0022857
Aed3g1545 325 PANTHER WAT1-RELATED PROTEIN 12 169 IPR030184 GO:0016021|GO:0022857
Aed3g1545 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 142 - -
Aed3g1545 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 208 292 - -
Aed3g1545 325 PANTHER WAT1-RELATED PROTEIN 170 313 - -
Aed3g1545 325 Pfam EamA-like transporter family 175 288 IPR000620 GO:0016020|GO:0016021
Aed3g1545 325 PANTHER WAT1-RELATED PROTEIN 12 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1545 Aed-Chr3 19898489 19903113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1545 13 319 Nodulin-like Gene Family AT1G44800 42.980 1.98e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1545 - - gmx:100782997 537.339