Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1541 ATGGAGGTTGTGAAGAATAGCCAAAAGCTAAAACAACAACAGCAGCAACAGCATTTTCATGTGTTGGTGGTAGATGATAGTGTCATAGATAGGAAACTTTTGGAGAGGCTCCTAAGAGATTCTTCATGCAAAGCTACCTTTGTGGATTCTGGAGACAAGGCTTTGAAATATCTTGGCCTTCTTGATAATGCTTCTTCAACTTCTTCAGAATCATTGCAGAAAAACGGAATAAAAGTGAATATGATCATGACAGACTACTGCATGCCAGGAATGAGTGGCTATGATTTACTCAAACGAATCAAGTTGCAGGGATCTTTTTGGAAAGATGTACCAGTCGTCATAATGTCATCAGAAAACGTACCATCTAGAATCAACATGTGCTTAGAAGAAGGGGCAGAGGAGTTTCTATTGAAGCCTCTTCAGCTATCAGATTTGAAAAAGCTTCAGCCATGCATTCTCAAATCCTTTGATAATTCTACTGAACAACAGCAACACCAATCTGCTGACACAACATCAATTGCATTGTGTCCAGATCAGCATGGTTTTAAAGTACTGCAGTTTGTATCTACATTAATATTGCGTTTTTGGAAGTCTCTATAG 600 0.3867 MEVVKNSQKLKQQQQQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKYLGLLDNASSTSSESLQKNGIKVNMIMTDYCMPGMSGYDLLKRIKLQGSFWKDVPVVIMSSENVPSRINMCLEEGAEEFLLKPLQLSDLKKLQPCILKSFDNSTEQQQHQSADTTSIALCPDQHGFKVLQFVSTLILRFWKSL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1541 199 Gene3D - 3 166 - -
Aed3g1541 199 Pfam Response regulator receiver domain 21 147 IPR001789 GO:0000160
Aed3g1541 199 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 168 IPR045279 GO:0009736
Aed3g1541 199 SMART REC_2 19 149 IPR001789 GO:0000160
Aed3g1541 199 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 6 168 - -
Aed3g1541 199 SUPERFAMILY CheY-like 19 153 IPR011006 -
Aed3g1541 199 CDD REC_typeA_ARR 21 148 - -
Aed3g1541 199 ProSiteProfiles Response regulatory domain profile. 20 153 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1541 Aed-Chr3 19869602 19872803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1541 16 172 Response Regulator Gene Family AT3G57040 54.321 6.05e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed3g1541 Response_reg 7.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1541 K14492 - gmx:100790440 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1541 3 19869602 19872803 Aed3g1541 3 19869602 19872803 ECH