Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1539 ATGGCGTCTAACACCACCAAGAGCAAAGTGTTTGATTCAGAAGAAGCTTCAGCTGTGGTTAAGGAACTGAGAGTAACGTTTGATAGTGGCAAGACACGTGGCTATGAATGGAGAAGCTCCCAGTTGAAGGGGATTATCAAGTTAACTGAAGAGAACGAGCAAGAGATTTTTCAAGCTCTTCACTCTGATTTATCTAAATCTGAAACCGAAGCCTTTGTGCAAGAGGTAGGTACTAATTAA 240 0.4167 MASNTTKSKVFDSEEASAVVKELRVTFDSGKTRGYEWRSSQLKGIIKLTEENEQEIFQALHSDLSKSETEAFVQEVGTN 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1539 79 SUPERFAMILY ALDH-like 14 73 IPR016161 GO:0016491
Aed3g1539 79 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 4 77 - -
Aed3g1539 79 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 77 IPR016162 GO:0016491
Aed3g1539 79 PANTHER ALDEHYDE DEHYDROGENASE 4 77 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1539 Aed-Chr3 19859170 19859409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1539 11 76 Aldehyde Dehydrogenase Gene Family AT4G34240 50.000 1.57e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1539 K00128 - pvu:PHAVU_001G0727000 110.923