Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1538 ATGTCGTCGTCGACGGCGCAGGACTCGGAGAAAACGACGACGAAGAAGAGCGCGTACGACGCGGAAGCGGCCCTGCTCGTGGAGGAGCTCCGGGGAAGCTTCGCCTCGAACAAAACGCGCAGCTACGAGTGGAGGCTATCGCAGCTCAAGGTGGTCGCGAAACTCCTCGCCGATCGCGAACAGGAGATCGTCGACGCGCTCCGAAACGACCTCGCCAAGCCGCCACTCGAAACCGTCGCTTACGAGATTGCTATGTTGAAAAACTCATGTAAAGTCGCACTCAAGGAATTGAAACATTGGATGACTCCTGAAAAGGTCAAAACTTCACTTGCAACTTTTCCTTCTTCCGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTAGTCATCTCTGCATGGAACTACCCATTCCTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATACTGTTGTTTTAAAACCATCAGAAATCGCTCCTGCCACATCATCACTGCTGGCAAAACTGCTCGGAGACTACTTGGATAACTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACATCCGCATTATTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTGGCACGCACTGTGATGGCTGCTGCTTCAAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAGTCTCCAGTTGTTGTTGATTCAAATATCAATCTAAAGGTAGCAACAAGACGAATAATTGCAGGAAAGTGGGGTTCTAATAATGGACAAGCCTGCATTTCTCCAGATTATATTATAACAACTAAAGACTATGCTCCCAAGTTGGTGGATGCCCTAAAGACTGAGTTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCCCGTATTGTGAACTCCAACCACTTTAATCGCTTGACAAAGCTCTTGGACGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGCAAAAAGGATGAAAGCAAATTGCAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGACTCTTTGATTATGAATGAGGAGATATTTGGTCCTTTACTTCCCATCCTCACGGTTGACAAACTAGAAGAAAGCTTTGAGGTGATCAAATCAGGAACAAAGCCTCTCGCTGCATATATATTTACCAATAACAAGAAGCTCAAGGAGAAATTTGTTACAACTATTTCAGCTGGCGGTTTGGTTGTTAATGACACTACATTACATCTTGCAGTTCATACTCTGCCATTTGGGGGAGTTGGTGAGAGTGGAGTGGGTGCATACCATGGGAAATTCTCATTTGAAGCTTTTAGCCACAAAAAAGCAGTTCTCTATCGCAAATTTTTTGGTGATGCAGCAGTAAGGTACCCACCATACACAAATACAAAGATGAGATTGCTGAAAGCTCTCATTGGTGGTGGCATACTTGGTATTATTCGTGCCCTGTTTGGTTTGTCATAG 1488 0.4483 MSSSTAQDSEKTTTKKSAYDAEAALLVEELRGSFASNKTRSYEWRLSQLKVVAKLLADREQEIVDALRNDLAKPPLETVAYEIAMLKNSCKVALKELKHWMTPEKVKTSLATFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNTVVLKPSEIAPATSSLLAKLLGDYLDNSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARTVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFNRLTKLLDDDKVSGKIVYGGKKDESKLQISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKLEESFEVIKSGTKPLAAYIFTNNKKLKEKFVTTISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFEAFSHKKAVLYRKFFGDAAVRYPPYTNTKMRLLKALIGGGILGIIRALFGLS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1538 495 PIRSF ALDH 5 485 IPR012394 GO:0006081
Aed3g1538 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 232 432 IPR016163 GO:0016620
Aed3g1538 495 SUPERFAMILY ALDH-like 24 468 IPR016161 GO:0016491
Aed3g1538 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 450 IPR016162 GO:0016491
Aed3g1538 495 PANTHER ALDEHYDE DEHYDROGENASE 10 495 IPR012394 GO:0006081
Aed3g1538 495 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 228 235 IPR029510 GO:0016491
Aed3g1538 495 Pfam Aldehyde dehydrogenase family 10 452 IPR015590 GO:0016491
Aed3g1538 495 PANTHER ALDEHYDE DEHYDROGENASE 10 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1538 Aed-Chr3 19836979 19844012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1538 83 495 Aldehyde Dehydrogenase Gene Family AT1G44170 75.061 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1538 K00128 - gmx:100778722 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1538 3 19836979 19844012 Aed3g1538 3 19836979 19844012 ECH