Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1535 ATGAACAGCGGCGATCCGTTTATTCTGCCTCTCAGCCTGGGTCAGGAGTGTAATGAGGCAACAGGAATGGATGATCCAGAATCTACTATGGCAAAAGTTGCTAATTTTGTGGAGCAACTGCGTGCAAACTTGTCATCACCAGTTGAGAAAGAAACTATTACAGCACACTTGCTAGGTATTGCCAGGAGAAGAAAAGATGCTAGGGTACTCATCGGTTCTCATGCCCAAGCCATGCCATTGTTCATAAGCATTCTCAGAAATGGAACCCCTCTTGCAAAAGTTAATGTTGCTTCCACTCTTAGTGTCCTGTGTAAAGATGAAGACTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCACCATTATTGTCACTTTTAAATTATGAATCCACCGACGCCAGGAAGGCAGCAGCTGAAGCAATATATGAAGTTTCCTCGGGTGGTCTATCTGATGATCATGTTGGTGTGAAAATTTTTGTTACTGAAGGTGTAGTTCCAACCTTATGGAATCAACTAAATCCATTGAACAAGAAAGACAAAATTGTGGAGGGTTTTATTACTGGAGCATTAAGAAATCTTTGTGGTGACAAAGACGGCTACTGGAAAGCAACATTAGAAGCCGGAGGTGTGGATATCATAGTAGGGCTCTTGTCTTCAGATAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTAGCACGTTTAATGCTGGCATTCACTGATAGCATCCCCAAAGTTATAGACTCTGGAGCAGTCAAAGCTTTACTTCAGCTTGTTGGTCGGGAAAATGACATTTCTGTAAGAGCTAGTGCTGCTGATGCCCTAGAGGCTCTCTCTTCAAAGTCTACCATGGCTAAAAAAGTCATTGTTAATGCAGATGGTATTCCAATCCTTATTGGAGCTATAGTTGCTCCTTCGAATGAGTGTATGCAAGGTGATGGTGGCCAGGCTCTACAGGAGCATGCAACACGAGCTTTAGCCAATATCTGCGGTGGCATGTCTGGTTTAATACTATATCTTGGAGAACTTTCACGTGTTCCTCACCTTGATGCACCGATTGGTGATATTATTGGCGCTCTTGCTTATACACTCATGGTCTTTGAGGAAAAAGTTGATGTCGATGAGAAACATTTTGATGCAACTCAGATAGAGGATATTCTAGTAACACTTTTAAAGCCTCGAGACAACAAACTGATTCAAGAGCGTGTCCTCGAGGCTATGGCTAGCCTATATGGAAACGTCTGTCTCTCAAAATGGCTCATTCAGGCAGATCCAAAGAAGGTTCTGATTGGACTTATAACCATGGCTGCCCCAGATGTGCAAGAGTTTCTGATACTTTCATTGACAAGCTTGTGTTGTGATAAGATTGGAATATGGGAGGCCATTAAAAAAAGGGAAGGTATCCAATTACTAATGTCATTGCTTGGATTATCCAGTGAGCAGCATCAAGAGTACTCAGTTCAGTTGCTAGCATTCTTAACTGACCAGGTCGATGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGTTGTTGGAGACAGGGTCACAGAAAGCAAGAGAGGAAGCAGCAAATGTTCTGTGGAGTTTGTGCTGTCACAGTGAAGATATTCGTGCTTGTGTTGAAAGTGCTGGGGCCATCCCAGCATTTTTGTGGCTTCTTAAGAGTGGTGGACCAAAAGGACAGAAAGCTTCTGCCATGGCACTCACAAAGCTTGTCCGAGTAGCTGATTCTGCCACAATTAATCAGCTATTAGCACTGCTCCTAGGGGATTCTCCAAGCTCGAAAGCCCACACAATCCGAGTTTTAGGTCATGTTCTTACTGTGGCTTCACAGAATGATCTCCTTGAAAAGGGTTCCGCAGCTAATAAAGGCTTGAGATCTCTAGTTCAAGTCCTCAATTCATCAAATGAGGAAACCCAAGAGCATGCAGTTTCAGTTCTAGCTGATTTGTTCATCACAAGAAAAGACATCTGTGATAGTCTTGCAACTGATGAGATTGTACGTCCTTGCATGAAGCTTTTGACTAGCAAAACTCAAGTTGTTGCCACTCAGTCAGCTCGAGCGTTAAGTGCCCTGTCTCGTCCAACAAAGAACAATGCTGCAAATAAAATGTCTTATATTGCAGAGGGTGATGTTGAGCCACTAATCAAGTTAGCTAAAACATCCTCTGTTGATGCTGCTGAAACTGCTGTTGCTGCATTGGCCAATCTTCTCTTTGATCCTTCTATTGCTGCTAAGGCTCTAGCTGAAGATGTTGTTTCAGCTTTAACAAGAGTTCTGGCAGAAGGGACCTTGGAAGGTAAACAAAATGCATCTCGTGCACTTCATCAATTATTGAAGCATTTTCCAGTGGGTGACGTTCTCAAGGGGAATGCTCAATGCCGTTCCACCGTGCTTGCACTTGTTGATTCCTTAAGAGCTATAGATATGAACGGAACTGATGCTGCAGATGCTTTAGAAGTAATTGCATTGCTAGCCAGGACTAAACAGGGTGTCAACGTCACTTACCCTCCATGGTCGGCTCTGGCTGAAATACCGTCAAGCTTAGAACTTCTTGTCTGCTGCCTGGCTGAGGGGGCTTCCCTTGTGCAAGACAAGGCAATTAAAATTCTATCTAGACTTTGTGGGGATCAGCCAGTTCTTATTGGTGATTTGTTATCTGCTAGTTCCAGATCCATTGGTTCATTGGCTAATAGAATAATGAACTCCTCCAGTCTAGAAGTAAAAATTGGAGGTGCTGCCTTACTAATTTGTGCTGCAAAGGAGAAGAAAGGGATTTCAATGGATTCACTTGACACTTCTGGGTATCTAAAACCATTAATATATTCTTTAGTTGAAATGATAAAGCAGAGTTGTAGCTATTCTTCGTTAGAAATTGAAGTGCTCATTTCTAAAGGTTTTATGGAGAGAAATGTTTTTCAAGAAGTTGATGAGTTTGATAGCCCTAATCCAGCCACTGCCTTGGGAAGCACTATTGCCATGTGGTTGCTTTCAGTTATTGCTTCTTTCCATATAAAGAGCAAGCTCACAATTATGGAAGCTGGTGGACTTGAAGTTCTCTCTGACAAACTTGCAAGACACACTTCAGATTCACAGGAAGAATATGAGGATACAGAAAGAATATGGATCAATGCCTTGCTCTTGGCCATTTTATTTCAAGATGCAAATGTCGTTCTATCTCCTGTCACAATGCACATTATACCTTCTATTACTCTTCTGCTAAGATCTGATGAAGTAATTGATAAATATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTAATAAGGGAATAGACCTTTCCATTGTAAATTCTGGTGCTGTTGCTGGATTGATAACTATTATTGGGCATGTAGAGTCAGATATACCTAATTTAATGGCTTTATCAGAAGAATTTTCTTTGGTACAAAATCCTGATCAAGTTGTTTTGGAGCACCTTTTCGAAATTGAAGATGTAAAAGTGGGGTCTACTGCCAGGAAATCTATACCCCTCTTAGTGGATCTCCTGAGACCAATACCAGAAAGGCCTAGCGCTCCACCAGTTGCTGTTAGACTCTTGATATCCATTGCAGATGGAAGTGACACCAATAAATTAATCCTGGCTGAAGCTGGAGCTCTGGAAGCTTTGAACAAATACCTGTCCTTGAGTCCTCAAGACTCAACTGAGTCTGCTATTTCCGAGTTATTGAGAATACTATTTTGCAATTCTGAACTTATTAAACACGAAGCAACAACAAATTCATTGAACCAACTCATAGCTGTTCTGCGTCTAGGATCAAAAAATGCTAGATATAGTGCAGCAAGAGCACTTCATGAACTTTTTGATGCTGACAACATTAGAGACTCAGAGTTAGCTAAACAGGCCATTCAGCCGTTGGTTGACATGCTTAACACAACATCAGGGCATGAACAGGAGGCTGCTCTCATGGCCTTGCTCAAGTTAACTTCAGGAAATTCTTCAAAAGTATCTCTTCTTATTGACGTGGAAGGAAACCCACTTAAATGCTTATACAAAATATTTTCTTCTGCTTCATCCTTGGAACTGAAGAGCCATGCTGCCCAACTCTGCTTTGCTCTTTTTGGCAATAGCAAGATCAGAGCAGATCCAGTTGCCTCAGAATGCCTAGAACCCCTTATATCCCTGATGCAATCTGGTTCTGAAACTGCAATAGAATCTGGGGTTTGTGCTTTTGAGAGATTATTGGAAGATGAACAACAGGTAGAGCTAGCAGCAGCCTACAATGTTGTGGATCTCCTTGTGAGCTTGGTTTCTGGTACCGACTATCAGCTTATCGAGGCTGCCATATCTGCTCTTATCAAATTGGGCAAAGACAGGACTCCAAGTAAACTAGACATGGTGAAAGCTGGCATTATTGAAAATTGTCTCAAGCTACTAGAATTAGCTCCTAGCTCTTTATGCTCCACAATAGCTGAGCTGTTTCGCATTTTAACTAATAGTAGTGCAATTGCAAGAAGTTCAGATGCTGCAGAAATTGTAGAACCTCTTTTCCATGTCTTGCTCCGTCGAGATTTTAACTTATGGGGACAGCATAGTGCCTTACAAGCACTTGTAAATATATTGGAGAAACCACAAAGTCTTGCAACCTTGAAGCTTACTCCAAGCCAAGTTATTGAACCCTTGATTTCTTTTCTTGAATCCCCATCCCAAGCTATTCAGCAGCTTGGCACAGAACTGTTATCTCATCTTCTTGCACAGGAATATTTTGAGCAAGATATTACAACAAAGAATGCAGTTGTGCCCCTCGTACAGCTTGCAGGAATTGGAATATTAAACTTACAGCAAACAGCGATAAAAGCATTGGAAAAAATTTCCACAAGTTGGCCAAAGGCAGTTGCTGATGCGGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGAAGACCCTCAACCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATGTATTACATTCCGATGCCGATTACTATTTTAAAGTTCCTGTGGTGGTTCTTGTAAAACTTTTGCACTCAACACTTGAGAGTACAATTAGCATAGCCCTTAATGCTTTAATAGTTCATGACAGAAGTGATGCTTCAAGTGCTGAGCAGATGATGGACGCTGGAGTTATAGATGCTCTGTTGGACCTTTTAAGATCTCATCATTGTGAAGAAGCATCTGGTAGATTACTAGAAGCTTTATTTAACAATGTGAGAGTACGGGAGATGAAGATGTCCAAGTATGCTATAGCGCCTTTATCCCAGTATCTCTTGGATCCGCAAACCAGATCACAGTCCGGCAAACTTCTTGCTGCTTTAGCTTTGGGAGATCTTTCCCAGCATGAAGGACATGCTAGATCTAGTGCCTCTGTTTCTGCATGTCGTGCATTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGAAGGTGGTGGCTATATGTGCATTGCAAAACTTTGTCATGAACAGCAGGACCAATAGACGAGCTGTTGCAGAAGCGGGGGGCATACTGGTGATTCAGGAATTGCTGTTGTCTCCAAACACAGAAGTTGCTGCACAAGCTGCTTTACTGATAAAATTTTTGTTTTCCACCCATACACTGCAAGAATACGTGTCAAATGAGTTGATCAGGTCTTTGACAGCTGCACTGGAAAGAGAGTTATGGTCAACTGCCACAATCAATGAGGAGGTTTTGAGAACTCTACATGTGATATTCATGAACTTCCCTAAGCTCCACACGTCTGAAGCAGCAACTCTTTGCATTCCTCATTTGGTAGGGGCACTAAAATCTGGCGGTGAAGACGCTCAGGACTCCGTACTTGACACGTTTTGCTTGCTAAGACAATCTTGGTCAACTATGCCAATAGATATAGCCAAGTCTCAAGCTATGATTGCTGCTGAAGCCATCCCCATTTTGCAAATGCTCATGAAAACATGCCCTCCTAGTTTCCATGAGAGGGCAGATACTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCACCATTAAGCGTGGAAACAACCTCAAACAAACTATGGGAAGCACTAATGCATTCTGTCGGTTGACAATAGGCAATGGTCCTCCAAAACAAACTAAGGCTTCATTTTTTGCTATTCCCAGTTTTCCTGTAGTGAATCATAGTACATCTCCAGAATGGAAAGAAGGATTCACTTGGGCATTTGATGTGCCTCCAAAGGGCCAAAAACTACATATCATATGCAAAAGCAAGAACACTTTTGGGAAGACAACTCTCGGAAAAGTCACTATCCAAATTGATAAAGTTGTATCAGAGGGGGTTTATAGTGGATTATTTAGTCTTAATCATGATGGTAACAAAGATGGTTCTTCCCGAACACTTGAAATTGAGATTATATGGTCCAACAGGATTTCCAATGATGACATTTGA 6423 0.419 MNSGDPFILPLSLGQECNEATGMDDPESTMAKVANFVEQLRANLSSPVEKETITAHLLGIARRRKDARVLIGSHAQAMPLFISILRNGTPLAKVNVASTLSVLCKDEDLRLKVLLGGCIPPLLSLLNYESTDARKAAAEAIYEVSSGGLSDDHVGVKIFVTEGVVPTLWNQLNPLNKKDKIVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVSQSNAASLLARLMLAFTDSIPKVIDSGAVKALLQLVGRENDISVRASAADALEALSSKSTMAKKVIVNADGIPILIGAIVAPSNECMQGDGGQALQEHATRALANICGGMSGLILYLGELSRVPHLDAPIGDIIGALAYTLMVFEEKVDVDEKHFDATQIEDILVTLLKPRDNKLIQERVLEAMASLYGNVCLSKWLIQADPKKVLIGLITMAAPDVQEFLILSLTSLCCDKIGIWEAIKKREGIQLLMSLLGLSSEQHQEYSVQLLAFLTDQVDDSKWAITAAGGIPPLVQLLETGSQKAREEAANVLWSLCCHSEDIRACVESAGAIPAFLWLLKSGGPKGQKASAMALTKLVRVADSATINQLLALLLGDSPSSKAHTIRVLGHVLTVASQNDLLEKGSAANKGLRSLVQVLNSSNEETQEHAVSVLADLFITRKDICDSLATDEIVRPCMKLLTSKTQVVATQSARALSALSRPTKNNAANKMSYIAEGDVEPLIKLAKTSSVDAAETAVAALANLLFDPSIAAKALAEDVVSALTRVLAEGTLEGKQNASRALHQLLKHFPVGDVLKGNAQCRSTVLALVDSLRAIDMNGTDAADALEVIALLARTKQGVNVTYPPWSALAEIPSSLELLVCCLAEGASLVQDKAIKILSRLCGDQPVLIGDLLSASSRSIGSLANRIMNSSSLEVKIGGAALLICAAKEKKGISMDSLDTSGYLKPLIYSLVEMIKQSCSYSSLEIEVLISKGFMERNVFQEVDEFDSPNPATALGSTIAMWLLSVIASFHIKSKLTIMEAGGLEVLSDKLARHTSDSQEEYEDTERIWINALLLAILFQDANVVLSPVTMHIIPSITLLLRSDEVIDKYFAAQAMASLVCNGNKGIDLSIVNSGAVAGLITIIGHVESDIPNLMALSEEFSLVQNPDQVVLEHLFEIEDVKVGSTARKSIPLLVDLLRPIPERPSAPPVAVRLLISIADGSDTNKLILAEAGALEALNKYLSLSPQDSTESAISELLRILFCNSELIKHEATTNSLNQLIAVLRLGSKNARYSAARALHELFDADNIRDSELAKQAIQPLVDMLNTTSGHEQEAALMALLKLTSGNSSKVSLLIDVEGNPLKCLYKIFSSASSLELKSHAAQLCFALFGNSKIRADPVASECLEPLISLMQSGSETAIESGVCAFERLLEDEQQVELAAAYNVVDLLVSLVSGTDYQLIEAAISALIKLGKDRTPSKLDMVKAGIIENCLKLLELAPSSLCSTIAELFRILTNSSAIARSSDAAEIVEPLFHVLLRRDFNLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEYFEQDITTKNAVVPLVQLAGIGILNLQQTAIKALEKISTSWPKAVADAGGIFELAKVIIQEDPQPPHALWESAALVLSNVLHSDADYYFKVPVVVLVKLLHSTLESTISIALNALIVHDRSDASSAEQMMDAGVIDALLDLLRSHHCEEASGRLLEALFNNVRVREMKMSKYAIAPLSQYLLDPQTRSQSGKLLAALALGDLSQHEGHARSSASVSACRALISLLEDQPTEEMKVVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNTEVAAQAALLIKFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLRTLHVIFMNFPKLHTSEAATLCIPHLVGALKSGGEDAQDSVLDTFCLLRQSWSTMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHERADTLLHCLPGCLTVTIKRGNNLKQTMGSTNAFCRLTIGNGPPKQTKASFFAIPSFPVVNHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKTTLGKVTIQIDKVVSEGVYSGLFSLNHDGNKDGSSRTLEIEIIWSNRISNDDI 2140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1535 2140 Gene3D - 1157 1340 IPR011989 -
Aed3g1535 2140 Gene3D - 1582 1792 IPR011989 -
Aed3g1535 2140 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 250 294 IPR000225 GO:0005515
Aed3g1535 2140 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 15 2138 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Aed3g1535 2140 SMART arm_5 106 146 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1703 1744 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 453 495 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1370 1410 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 660 700 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 618 658 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 282 331 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1538 1579 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 151 195 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1201 1241 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1411 1451 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 196 237 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1285 1324 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 239 280 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1243 1283 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 539 579 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 746 786 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1453 1493 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 1829 1869 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 497 537 IPR000225 GO:0005515
Aed3g1535 2140 SMART arm_5 705 745 IPR000225 GO:0005515
Aed3g1535 2140 ProSiteProfiles C2 domain profile. 1983 2110 IPR000008 -
Aed3g1535 2140 Pfam C2 domain 2003 2112 IPR000008 -
Aed3g1535 2140 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 508 550 IPR000225 GO:0005515
Aed3g1535 2140 PANTHER - 15 2138 - -
Aed3g1535 2140 CDD C2 2004 2104 - -
Aed3g1535 2140 Gene3D - 23 151 IPR011989 -
Aed3g1535 2140 Pfam Armadillo/beta-catenin-like repeat 501 536 IPR000225 GO:0005515
Aed3g1535 2140 SUPERFAMILY ARM repeat 77 791 IPR016024 -
Aed3g1535 2140 SMART C2_3c 2003 2109 IPR000008 -
Aed3g1535 2140 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2001 2130 IPR035892 -
Aed3g1535 2140 Gene3D - 1793 2000 IPR011989 -
Aed3g1535 2140 Gene3D - 152 355 IPR011989 -
Aed3g1535 2140 SUPERFAMILY ARM repeat 1171 1577 IPR016024 -
Aed3g1535 2140 SUPERFAMILY ARM repeat 1580 2000 IPR016024 -
Aed3g1535 2140 Gene3D - 985 1138 IPR011989 -
Aed3g1535 2140 Gene3D - 363 622 IPR011989 -
Aed3g1535 2140 Gene3D - 1341 1581 IPR011989 -
Aed3g1535 2140 SUPERFAMILY ARM repeat 713 1102 IPR016024 -
Aed3g1535 2140 Gene3D - 623 834 IPR011989 -
Aed3g1535 2140 Gene3D C2 domain 2001 2138 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1535 Aed-Chr3 19787275 19798947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1535 468 709 U-box Gene Family AT2G23140 29.317 8.90e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1535 - - gmx:100796864 3782.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1535 3 19787275 19798947 Aed3g1535 3 19787275 19798947 ECH