Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1528 ATGTCGTCGACGCAGAATAATCGCCGTTCGTCGTTTACATCCTCAACAGCGTCGTCTTTGGCGAAGGCGAAACCACATCCGCCGCCGCTGGTGTCGTCGTCGTCGTCGTCGGGGAAGGCGAAGGTAGTTTCCACTCAGAACGTGGCTGTGAAGAGAGCGCCTCTCGCCAACCTCACTAATCAGAGGAAAGCGCCTTCTTCTTCTTCTTCTTTGGTGCAAGGTTCTATTAAAGTTGCCAAGACCAAGAAAGAGGCTTCTGCAAGAACCAGCATAGCAAAATCAACAATTTCTGGGAACAAATTCAAATTACCTGAGTTAAAATCTGTTAACTCAAGCTCAGCTGTTGTTCCAAAGGCCAATTCTTTGCTACAAAGGAAGGATGCTGCCCCCACTGCTGCTCCCACAGTTGCCACATTCTTCGCCGTGCCTGTTCGTAGCAGCATTCATGTTTCTCCTACTAAATCTGATGGAAGGTCCGTTTCTATGGATGAGACAATGTCTTCTTGTGATTCTATCAAGAGTCCTGATGAAATTGAATATCTGGATAACAGGGATGTTTCAGATGTTGATTCAATTCAGAGAAAGATAATAGGCAATTTGAACATTTCTGATACCACAGAGCCAGAAGGAAACTTATGTACCGGGGAAATAATTGTTGAGTTGGAAAGCAAGGATGATAAGATTGTCAATATCGATAACATTTACTCCGATCCACAGCTTTGTGCAACCTATGTTTGTGACATCTACAAACACCTACGTGAATCTGAGGAAAAGAAAAGGCCTTCCACTGACTTCATGGACAGAATTCAGAAGGACATAAATGTTAGCATGCGCGCTATATTGGTTGACTGGCTTGTTGAGGTGACTGAGGAGTATCGTCTTGTACCTGATACATTGTATTTGACAGTGAACTACTTAGATCGGTATCTTTCAGGGAATGCTATGAATAGGCAAAAGTTGCAATTACTTGGTGTCTCATGCATGATGATTGCCTCGAAATATGAGGAGATTTGTGCACCTCAGGTGGAAGAATTTTGTTATATAACTGACAATACTTACTTAAAAGAAGAGGTTTTGAAAATGGAATCTGCTGTCTTGAATTATCTTAAGTTCGAAATGACAGCCCCAACAGTTAAATGTTTCTTAAGACGATTTGTTCGTGCCGCTGCTCATGATGTCCAAGAGATCCCTGCACTTCAACTGGAGTGCCTAACCAACTTCATTGCCGAATTATCTCTCTTGGAGTACAGTATGCTGTGTTATCCTCCATCACTGATAGCTGCTTCTGCAATTTTCCTTGCCAGATTTATACTCTTCTCTTCAAAGAAACCATGGTACAAATGTGTGGCCAAGAAGTACATCCCTGCTTCAATACCGCAAGAAGTTTTCCAGAACTGA 1398 0.4278 MSSTQNNRRSSFTSSTASSLAKAKPHPPPLVSSSSSSGKAKVVSTQNVAVKRAPLANLTNQRKAPSSSSSLVQGSIKVAKTKKEASARTSIAKSTISGNKFKLPELKSVNSSSAVVPKANSLLQRKDAAPTAAPTVATFFAVPVRSSIHVSPTKSDGRSVSMDETMSSCDSIKSPDEIEYLDNRDVSDVDSIQRKIIGNLNISDTTEPEGNLCTGEIIVELESKDDKIVNIDNIYSDPQLCATYVCDIYKHLRESEEKKRPSTDFMDRIQKDINVSMRAILVDWLVEVTEEYRLVPDTLYLTVNYLDRYLSGNAMNRQKLQLLGVSCMMIASKYEEICAPQVEEFCYITDNTYLKEEVLKMESAVLNYLKFEMTAPTVKCFLRRFVRAAAHDVQEIPALQLECLTNFIAELSLLEYSMLCYPPSLIAASAIFLARFILFSSKKPWYKCVAKKYIPASIPQEVFQN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1528 465 PIRSF Cyclin_A_B_D_E 44 456 IPR039361 -
Aed3g1528 465 Gene3D - 261 374 - -
Aed3g1528 465 PANTHER CYCLINS 41 451 IPR039361 -
Aed3g1528 465 MobiDBLite consensus disorder prediction 29 76 - -
Aed3g1528 465 ProSitePatterns Cyclins signature. 278 309 IPR006671 -
Aed3g1528 465 PANTHER CYCLIN-A1-1 41 451 - -
Aed3g1528 465 SUPERFAMILY Cyclin-like 355 435 IPR036915 -
Aed3g1528 465 Pfam Cyclin, C-terminal domain 376 446 IPR004367 -
Aed3g1528 465 MobiDBLite consensus disorder prediction 151 170 - -
Aed3g1528 465 SMART Cyclin_C_2 376 461 IPR004367 -
Aed3g1528 465 Pfam Cyclin, N-terminal domain 247 373 IPR006671 -
Aed3g1528 465 Gene3D - 247 449 - -
Aed3g1528 465 MobiDBLite consensus disorder prediction 1 21 - -
Aed3g1528 465 MobiDBLite consensus disorder prediction 1 91 - -
Aed3g1528 465 SMART cyclin_7 283 367 IPR013763 -
Aed3g1528 465 SMART cyclin_7 380 464 IPR013763 -
Aed3g1528 465 CDD CYCLIN 277 366 IPR013763 -
Aed3g1528 465 CDD CYCLIN 374 451 IPR013763 -
Aed3g1528 465 SUPERFAMILY Cyclin-like 236 373 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1528 Aed-Chr3 19590066 19594818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1528 1 465 Core Cell Cycle Gene Families AT1G44110 51.468 5.92e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1528 K06627 - gmx:100776207 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1528 3 19590066 19594818 Aed3g1528 3 19590066 19594818 ECH