Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1507 ATGTGGAGAGAGAGAGCGTTACTATCAGTAGTAGTAATCCTGGTAGTTTTTCAAGTGCAGAAAATTTGTGCTACCAACACCAAGCAACAAGAGCATGCTTGTCCTGTTTCTTCTTCTTCCTGTGGCAAAATCAGCAACATAACTTATCCATTTCGATTAAAAAGCGACCCAAAAAGTTGTGGCGACACCAGGTATGAGCTTGCCTGTGAAAATAATGTTACGGTGTTATATTTGTACTCTGGAAAATATAAAGTGCAGGCAATCAACTACAACAATTTCACAATCCGAGTGGTGGATCCGGGACTTCAACAATCAAATTGCTCATCCCTTCCTCGCTATTTCTTGACTCAATCAAATTTCACGGATACTTATATTGGACCATCCACGGATCCATACCAAGCGGGTCGAAATCCATATTATAACGGTGATGATCTTCTTTTCAAGCAAATAATATTCTTGAATTGTACCCATCCGATCACGGACGATCCAGATTACGTTGACACCGCTCCCTGCATCGTCAACGAGAAGTCCAAAGACCATATCTACGCCGTCGGCGGTGACTTAGCAGCAGAGAAGTTGCGGGACGGTTGTCATGTGAAGCTGGTTGGTCTCCAATCTTGGTCGGGTTTGGACAGAAATGGAAATTCTTCCTACAGTCTGATGCACAAGGCGTTAGTGTATGGATTTGAGATTTCGTGGCTGAGTCTCCCCTGTGAGGATCTCTGTGGGCTTCCAAGAAGCTACTGTTCTTTCAAGTCTTCCACCCTTAAGATTCATTGCTCGCAGCCCTACTGCCAAAGGATATGGCCCCAGCTGCTACAATATGCAAAATATACTATTCATGCTATCTGGATAGGACTCCTTGAACTAATTAAAGGACGAAACGAAAGATTTGAAGGTTTCACCGAATATAAATTAGGATTAACCATAGGACACTACATTCTACCATCCTTTTGGGCAGGCAAATATTTTTTTGGATTAACGTTGTTTATTGCACTTATGATATACAAATGGAAAAAAAGGCATTTGTCAATGTACGAAAACATTGAAAATTTTATTGAGCAAAACAACTTGATGCCCATTAGATATTCATACAAGGAAATTAAGAAGATGGCCAGAGGTTTTAAGGATAAGTTGGGTGAGGGAGGATATGGTTGTGTATTCAAGGGAAAGTTATGTAGTGGACCTTCAGTGGCAATAAAAATGTTAGGTAAATCAAAAGGAAATGGACATGATTTTATTAGTGAAGTTGCAACAATTGGAAGAATACATCATCATAATGTGGTGGAATTAATTGGATTTTGTGTTGAAGGATCCAAACGTGCTCTTCTATACGAATTCATGCCAAATGGATCTCTTGATAAATTTATTTTTTCCAAGGATGGGAGTATAGATTTAAGTTATCACAAGATATATGATATATCAATTGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTGCATTTTGACATCAAGCCCCACAACATTCTGCTGGATGAAAAATTCACCCCAAAGGTCTCCGACTTCGGATTGGCAAAGTTATATCCATTAGATAATAGCATTGTCACCATGACAGCAGCAAGAGGGACAATTGGATATATGGCTCCAGAATTATTTTATAAAAATATTGGTGGAATATCCCACAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGGCAGGCAGGAGGAGAAATCTTAATCCCCATGCAGAGAATTCAAACCAAATTTACTTTCCCTTTTGGATTTATGATCAACTTGAAAAGGAGAAAGACATAGAAATGGAAGATGTCAACGAGGAAGAAAAACAAATAGCAAAGAAAATGATCATTGTTGCCCTCTGGTGTATACAACTAAAACCGAATGATCGTCCTTCAATGAATAAAGTAGTAAAGATGCTTGAAGAAGACATTGAGAACTTAGAAATACCTCCAAAACCTTCTTTATATCCACATGAAACAATGTCGTCAGAAGATCAATATAGCCATTAA 2019 0.3898 MWRERALLSVVVILVVFQVQKICATNTKQQEHACPVSSSSCGKISNITYPFRLKSDPKSCGDTRYELACENNVTVLYLYSGKYKVQAINYNNFTIRVVDPGLQQSNCSSLPRYFLTQSNFTDTYIGPSTDPYQAGRNPYYNGDDLLFKQIIFLNCTHPITDDPDYVDTAPCIVNEKSKDHIYAVGGDLAAEKLRDGCHVKLVGLQSWSGLDRNGNSSYSLMHKALVYGFEISWLSLPCEDLCGLPRSYCSFKSSTLKIHCSQPYCQRIWPQLLQYAKYTIHAIWIGLLELIKGRNERFEGFTEYKLGLTIGHYILPSFWAGKYFFGLTLFIALMIYKWKKRHLSMYENIENFIEQNNLMPIRYSYKEIKKMARGFKDKLGEGGYGCVFKGKLCSGPSVAIKMLGKSKGNGHDFISEVATIGRIHHHNVVELIGFCVEGSKRALLYEFMPNGSLDKFIFSKDGSIDLSYHKIYDISIGVARGIAYLHHGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPLDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMAGRRRNLNPHAENSNQIYFPFWIYDQLEKEKDIEMEDVNEEEKQIAKKMIIVALWCIQLKPNDRPSMNKVVKMLEEDIENLEIPPKPSLYPHETMSSEDQYSH 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1507 672 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 9 667 - -
Aed3g1507 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Aed3g1507 672 SUPERFAMILY Protein kinase-like (PK-like) 358 644 IPR011009 -
Aed3g1507 672 Pfam Protein kinase domain 376 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1507 672 MobiDBLite consensus disorder prediction 653 672 - -
Aed3g1507 672 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 667 IPR045874 GO:0004672
Aed3g1507 672 SMART serkin_6 373 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1507 672 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Aed3g1507 672 Coils Coil 593 613 - -
Aed3g1507 672 ProSiteProfiles Protein kinase domain profile. 373 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1507 672 Gene3D Transferase(Phosphotransferase) domain 1 448 652 - -
Aed3g1507 672 Gene3D Phosphorylase Kinase; domain 1 347 447 - -
Aed3g1507 672 Pfam Wall-associated receptor kinase galacturonan-binding 38 99 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1507 Aed-Chr3 19366779 19372498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1507 8 659 Receptor kinase-like Gene Family AT5G38260 34.918 2.34e-116 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aed3g1507 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1507 - - gmx:100305367 914.45