Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1501 ATGAAAATGCTGCTGCTGCCACCTGCCACCGCTGGAGATGGTGGCGCCGGCGGCCGCACGGTGGTGGTGGGAATGAAGATGGACTCCGACTCCCACTGCAGCACCGAGTTGCTGACTTGGGCTCTGTTCAAAGTGGCTCAGCCCGAAATTGTGAATCGAGAAGGAAAATCATCTCTGTTTTCGCTTGTCAAAGCGTTTGATTCTATTCTTGCCGTTTATGAAGGATTCTGCAATTTGAAACAGGTGGATCTCAAGTTCAAAATATGTCGTGGTTCATCAGTGAGGAGAATTTTGGTTCGAGAAGCAAATTCTTATCCTGCAACGCACATCATAGTTGGAAGTTCTCAAGGCCTTCATATAATTCGGCCATGTGTATCCGTGGCAAGGTACTGTGCTAAGAAGTTACCAAAAGATTGTTGGGTTCTTGCTGTTAATAACGGGAAAATCGTGTTCAAGAAAGAAGGGTCACCCGCAACTAACAGTGCTGAATTAAAAGGTGGACTTGATCAGGATCGCGGAACCGGGTTGTTGGGTTCGATTCACAGGGCACTCAGCAAGAGCTCCAAAGTGCTAGATGAAGATGTTGTTGGTTTTGGGATGCATGAGAAGGGTGAATATTCAGATCACAGTTTGGCTAAGGCTCTTCTTGATTCTAAAGATTTCGTTGAGAAGAAGAGGTGCTCTATTTGTTGTTCTTCTTCGGAAGAACAACAACAAGAGTCTTGTGGTGATGGCAGTGACTACGACAATGACAATAACAATAATCCTTTGAACGAGCCTTTGGCAATAGTGCCTGTGCTGCAGACCAATGATGATTCTGCTTCTTCCAAACTGGGTTGGCCTCTGCTTCGTAAGATGATTGTATCCGACAGAAAAGGTTCTGGAAGATCGCTGCTGCGCCAGACCTCGGTGGTTCAATGGGCAATGCAGTTGCCCACTAGAGATCTTTCATATGCTGCACATCATGATCAAAGAACTAACAATTGTGACATGAATAAGGACCAGTTTCTGGCTCTAGACAGCAAGAGTGGTGCTCTTGTTCCGGTTGATGCTGAAATAGGGACTGCTAGTTCGCCCGAACGCCATTCAATAAGCCTTCCTAAGGAGTTGGAGGGCCTCCATGAGAAATACTCATCCACCTGCAGATTGTTTCAGTACCAAGAACTTGTATTGGCAACATCAAATTTCTTGCCAGAAAATTTGATTGGAAAAGGAGGGAGTAGTCAGGTTTATAGAGGTTACCTTCCTGATGGCAAGGAACTTGCAGTTAAGATCTTAAAGCCGTCTGATGATGTTTTGAAGGAGTTTGTTCTAGAAATAGAAATCATCACTACCTTGAATCACAAAAACATTATTTCCCTCCTTGGATTCTGCTTTGAGGATGGAAATAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAATCTCCATGGTACACACACTACATTCTTATATCACCTTTATTTATCTATTTTTCACTCTATGTTGTTTTTGTCTTGTTTGGATATAAGGTTAGAAATGTTGATTTTGACAGCTTTTTTACCGAAAAAGATTCTATATTTTCAATAA 1584 0.4287 MKMLLLPPATAGDGGAGGRTVVVGMKMDSDSHCSTELLTWALFKVAQPEIVNREGKSSLFSLVKAFDSILAVYEGFCNLKQVDLKFKICRGSSVRRILVREANSYPATHIIVGSSQGLHIIRPCVSVARYCAKKLPKDCWVLAVNNGKIVFKKEGSPATNSAELKGGLDQDRGTGLLGSIHRALSKSSKVLDEDVVGFGMHEKGEYSDHSLAKALLDSKDFVEKKRCSICCSSSEEQQQESCGDGSDYDNDNNNNPLNEPLAIVPVLQTNDDSASSKLGWPLLRKMIVSDRKGSGRSLLRQTSVVQWAMQLPTRDLSYAAHHDQRTNNCDMNKDQFLALDSKSGALVPVDAEIGTASSPERHSISLPKELEGLHEKYSSTCRLFQYQELVLATSNFLPENLIGKGGSSQVYRGYLPDGKELAVKILKPSDDVLKEFVLEIEIITTLNHKNIISLLGFCFEDGNNLLLVYDFLSRGSLEENLHGTHTTFLYHLYLSIFHSMLFLSCLDIRLEMLILTAFLPKKILYFQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1501 527 PANTHER OS01G0253100 PROTEIN 10 485 IPR045271 GO:0004714|GO:0006468
Aed3g1501 527 Gene3D Phosphorylase Kinase; domain 1 363 471 - -
Aed3g1501 527 MobiDBLite consensus disorder prediction 238 259 - -
Aed3g1501 527 Pfam Protein kinase domain 400 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1501 527 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 10 485 - -
Aed3g1501 527 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Aed3g1501 527 CDD USP_Like 20 141 - -
Aed3g1501 527 ProSiteProfiles Protein kinase domain profile. 396 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1501 527 SUPERFAMILY Protein kinase-like (PK-like) 377 499 IPR011009 -
Aed3g1501 527 SMART serkin_6 396 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1501 Aed-Chr3 19285414 19290350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1501 376 483 Receptor kinase-like Gene Family AT5G56890 38.532 3.77e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed3g1501 Pkinase 1.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1501 - - aprc:113846853 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1501 3 19285414 19290350 Aed3g1501 3 19285414 19290350 ECH