Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1483 ATGAAACAAATGCAACCGTGTCGTGTGTTAATGTTTGCATTAGCCCTGGTAGCTTTTGCACCTCATCAAACCCTTTCTGCATCACCACTAATCCAAACTCTCCCTGGCTGCAACTCCACTTGTGGAGACATCCAAATTCCTTATCCATTCGGCATAGGCAACTCATCTACACCCAATCAACAACCCTGTTTCTTGAACACCAAATTCAATCTTACATGCACTAACTCCACACTATATTACGGTAACATAGTAGTTTCAAACATAAGCCTCCCAAATCACCAAATAGACCTATTGTTCTACGTTGCATCGCTTTGTCACAGGGAAAATGGAAGTGAACTCCCTCCATTGTACTCCAGTCTCAGCATCGGTAGCAATTTCAGCATTTCGAGCAAGGATAACAAGTTACTCACCATCGGCACCGATAGCTACGGCTATGTCAACAGTTTCTTCAACGGGGAGTCGTATTCAACAGGGTGCTTGACGAGCTCTCATGGCAACTCGATGAAGATCAAAAACGGAACTTGCTCTGGTATAGGGTGTTGCCAGGTTGATATTCCTCCTGGAATGAGGAACATCTCTGTATGGGTAGAACTTCTCAATAATACAACGCCCAATTGGGGAAACTGCAGCTATTCATTTGTTGTAAAAAATGGCGCTTATAATTTTTCTACCACTGATTTAAGGAGTTTCCCACACAATACTCTGCCCTTGGTTCTTGATTGGACTGTGGGAAACAAAACCTGTGATGATTCCAAGAGTAGAGAGGACAACGCGTGCAAGGAGAATAGCAATTGTGACGACAACGACAGTGACTATGGTTATCGATGCAAATGTAACGATGGCTATGAAGGAAACCCATATCTTGGCTGCATAGACATCGATGAATGTAAGACGGACAAACATACATGCATAAGTGAGCAAAATTGTGTCAATTCCAATGGATCCCATGCATGTTTCTGTCCAGAGGGGCAATCCGGAAATGGAACAAAGGTAGCAGGGTGCCACCAACCAGATGTGGTTACCAAGGTTGTCATAGGAGTAGGAGCAGCAATTCTTGTTTTATTTGTGGGTACTACCTCACTGTACTTGATATATCAGAGAAGAAAACTCGTCAAACTTAAGGAGAAATATTTTCAGCAGAATGGTGGTTCCATTTTGCTACAGCAAATCTCTACGAGAGAAAACTCCTCCCAAATTACTCAAATTTTCTCCGAAGAACAACTAAAAAAGGCCACCAACAACTTTGACGAGAGTTTAATCATTGGCAGTGGAGGTTTTGGAACTGTTTTCAAAGGATTTCTAGCTGATAACAAGATTGTTGCGGTCAAGAAGTCTAAAGTAGTGGACGAGAGCCAAAAGGAACAATTCATTAACGAGGTGATTGTTTTATCACAAATCAATCATAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGAGAAGTTCCGTTACTGGTTTATGAATTTGTTAATCATGGCACCCTTTTTGATTTTATACACACCGAAAGAAAGGTAAATAATGAAATTTGGAATATCCGTTTAAGGATAGCAGTTGAGGCAGCTAGCGCTCTATCTTATCTTCACTCAGCAGCCTCAATAGCAATTATCCACAGAGATGTCAAGACTGCTAACATCCTCTTGGATGAGACATACACCGCCAAAGTGTCGGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCATACTGAAATAGCCACAATGGTGCAAGGAACTTTTGGTTACCTGGACCCAGAGTACATGCTTACAAGCCAACTAACTGAGAAAAGTGATGTCTACAGCTTTGGGGTAGTGCTTGTAGAGCTATTAACAGGGGAGAAACCTTATTCTTTTGGCAAGCCAGAGGAAAAAAGAAGTCTTACTAACCACTTTTTGTCTTGCTTGAAAGAGGATCATCTGTTTGATGTACTTCAAGATGGCATTGTGAATGAAGAAAATAAAAAGGAGATCATGGAGGTTGCTATTCTTGCTGCAAAGTGCTTAAGACTCAATGGGGAGGAAAGGCCAAGCATGAAGGAAGTGGAAATGGAGTTGGAGGGAATAAGGAAAATGGAGAAGCATCCATGGATTAATACAGATCACAATCTAGAGGAGACTCAACACTTGCTTCACGAGGCATCATCTAGCATTTATGAGCATGGTGATAACAGCATCCATCAATATGCTGGGTATGATAGCATTAGGGATCATGTACAAATTACTTTGGATGATGGTAGATGA 2241 0.4145 MKQMQPCRVLMFALALVAFAPHQTLSASPLIQTLPGCNSTCGDIQIPYPFGIGNSSTPNQQPCFLNTKFNLTCTNSTLYYGNIVVSNISLPNHQIDLLFYVASLCHRENGSELPPLYSSLSIGSNFSISSKDNKLLTIGTDSYGYVNSFFNGESYSTGCLTSSHGNSMKIKNGTCSGIGCCQVDIPPGMRNISVWVELLNNTTPNWGNCSYSFVVKNGAYNFSTTDLRSFPHNTLPLVLDWTVGNKTCDDSKSREDNACKENSNCDDNDSDYGYRCKCNDGYEGNPYLGCIDIDECKTDKHTCISEQNCVNSNGSHACFCPEGQSGNGTKVAGCHQPDVVTKVVIGVGAAILVLFVGTTSLYLIYQRRKLVKLKEKYFQQNGGSILLQQISTRENSSQITQIFSEEQLKKATNNFDESLIIGSGGFGTVFKGFLADNKIVAVKKSKVVDESQKEQFINEVIVLSQINHRNVVKLLGCCLEREVPLLVYEFVNHGTLFDFIHTERKVNNEIWNIRLRIAVEAASALSYLHSAASIAIIHRDVKTANILLDETYTAKVSDFGASRLVPLDHTEIATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKPYSFGKPEEKRSLTNHFLSCLKEDHLFDVLQDGIVNEENKKEIMEVAILAAKCLRLNGEERPSMKEVEMELEGIRKMEKHPWINTDHNLEETQHLLHEASSSIYEHGDNSIHQYAGYDSIRDHVQITLDDGR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1483 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Aed3g1483 746 Pfam Calcium-binding EGF domain 292 331 IPR001881 GO:0005509
Aed3g1483 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 27 716 - -
Aed3g1483 746 Pfam Wall-associated kinase 173 279 IPR013695 GO:0004674|GO:0016021
Aed3g1483 746 CDD STKc_IRAK 421 688 - -
Aed3g1483 746 ProSiteProfiles EGF-like domain profile. 292 335 IPR000742 -
Aed3g1483 746 ProSiteProfiles EGF-like domain profile. 250 291 IPR000742 -
Aed3g1483 746 SUPERFAMILY EGF/Laminin 292 327 - -
Aed3g1483 746 SMART serkin_6 415 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1483 746 Pfam Wall-associated receptor kinase galacturonan-binding 37 96 IPR025287 GO:0030247
Aed3g1483 746 SMART egfca_6 292 335 IPR001881 GO:0005509
Aed3g1483 746 Gene3D Phosphorylase Kinase; domain 1 380 490 - -
Aed3g1483 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 716 IPR045274 GO:0007166
Aed3g1483 746 SMART egf_5 295 335 IPR000742 -
Aed3g1483 746 SMART egf_5 247 291 IPR000742 -
Aed3g1483 746 Pfam Protein kinase domain 419 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1483 746 Gene3D Plasmodium vivax P25 domain 238 340 - -
Aed3g1483 746 ProSitePatterns EGF-like domain signature 2. 276 290 IPR000742 -
Aed3g1483 746 ProSiteProfiles Protein kinase domain profile. 415 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1483 746 SUPERFAMILY Protein kinase-like (PK-like) 394 685 IPR011009 -
Aed3g1483 746 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Aed3g1483 746 Gene3D Transferase(Phosphotransferase) domain 1 491 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1483 Aed-Chr3 18977284 18980178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1483 11 746 Receptor kinase-like Gene Family AT1G21230 43.026 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aed3g1483 Pkinase 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1483 - - gmx:106795446 1229.16