Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1478 ATGGAACACTTTCAACTGTGTCGTGTGTTAATGTTTGCATTAGCCATTGTAATTGCAACTCTTCAAACCCTTTCAGCCACACCACCAAAACAAGCCCTGAGTGGCTGCAAAACAACCTGTGGAGGCGTCGAAATTCCGTATCCATTCGGCATAGGCAACAAAAACTGTTTCTTGCGGAGCAAGTTTAGCCTTACTTGCAATGAGTCCACACTGTACTACGGTGGCTTGATGGTTTCAAACATAAGTCTTTTAAGTCACCAAATGGACGTGCTATCCCGTGTCTCGTCGCTCTGCCACATGAATAATGGTAGCCAACTCCCGGATTACTACCGTCTCCGCACCGGCAGCTTCAGCATTTCGAGCAAGGAGAACAAGTTTCTGACCGTCGGCAGCGACAGCTACGGCTACTTCAACAGTTTCTTCAACGGGGAGTCGTATTCAACAGGGTGCTTGACGAGCTCTCATGGCAACACGAAGAAGATCGAAAACGGAACGTGCTCGGGTATCGGGTGTTGCCAGGTTGATATTCCTCCCGGAATGAGGAATATCACTGTGCGGGCTAGAGTGTTCTCCAATTCGACGTTGGATTGGGGAAACTGCACCTACTCCTTTGTTGTGAAAAATGGTGCTTATAATTTTTCCACCACTGATTTGCAGAGTTTCCGATCCAAGAGGCTCCCCTTGGTTCTTGAATGGACTGTGGGAAACAAAAGTTGTGATGATTCCAAGAGTAGACGCGACTATGCGTGCAAGGAGAATAGCTATTGCGACGACAAGGACAGTGATCTTGGTTATCGATGCAGATGTAAGGATGGCTATGAAGGAAACCCGTATCTTGGCTGCGCAGACATTGATGAATGTAAGACAGATAATCATACATGCATAAGTAAACAAAATTGCTTCAACACCGATGGAAACCACACATGTTTCTGTCCAAAGGGGCACTCTGGAAACGGAACAAAGGGAGTAGGGTGCCACCAACGAGATATGGTTACCAAGGTTATTGTAGGAGTAGGAGCAGCAATTGTAATTTTGTTTGTGAGCATGGCCTCATTTTACTTGATATACCAGAAAAGGAAACTCGTCAAACTTAGAGAGAAATACTTTCAGCGGAATGGTGGTTCCATTTTGCTACAACAACTTTCAACGAGAGAAAACTCCTCCCAAATTACTCAAATTTTCACTGAAGAAGAGCTACAGAAGGCTACCAACAACTTCGACGAGAGCTTAATCATTGGCAGCGGAGGTTTTGGAACTGTTTTCAAAGGATTTCTAGCTGATAACAAAATTGTTGCAGTCAAGAAGTCTAAAATAGTGGACGAGAGCCAAAAGGAACAATTCATTAATGAGGTGATTGTTCTATCCCATATCAATCACAGGAATGTCGTCAAACTCTTGGGATGTTGTTTAGAGAGAGAAGTTCCTTTACTTGTTTATGAATTTGTTAATCATGGCACCCTTTCTGATTTTATACACACCGAAAGAAAGGTAAATAGTGAAATTTGGAATATCCGTCTGAGGATAGCAGCTGAGGCAGCTGGGGCTCTATCATATCTTCACTCAGCAGCCTCAATAGCCATTATCCATAGAGATGTCAAGACTGCTAACATCCTCTTGGATGAAACATACACAGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAATAGCCACAATGGTGCAAGGAACTTTTGGCTACCTGGATCCAGAGTACATGCTTACAAGCCAACTAACTGAGAAAAGTGATGTCTACAGCTTTGGGGTAGTTCTTATAGAGTTGCTAACAGGAGAGAAACCTTATTCTTTTGGCAAGATAGAAGAGAAAAGAAGTCTCACTAACCACTTTTTGTCTTGCTTGAAAGAGGATCGTGTGTTTGATGTTGTTCAAGTTGGCATGGTGAATGAAGAAAATAAAAAGGAGATCATGGAGGTTGCTATTCTTGCTGCAAGGTGCTTGAGACTTAATGGGGAGGAAAGGCCTAGCATGAAAGAAGTGGAAATGGAGTTGGAAGGAATAAGGAAAATGGAGAAGCATCCATGGAATAATACAGATCAAAATTTAGAGGAGACTCAATACTTGCTTCACGAGGCATCATCTAGCATTTATGAGCATGGTGATAGCAACAACCATCAATATGCTGGGTATGACAGCATTAGGGATCATGTATTGATTGCTTTGGATGATGGAAGATGA 2214 0.4295 MEHFQLCRVLMFALAIVIATLQTLSATPPKQALSGCKTTCGGVEIPYPFGIGNKNCFLRSKFSLTCNESTLYYGGLMVSNISLLSHQMDVLSRVSSLCHMNNGSQLPDYYRLRTGSFSISSKENKFLTVGSDSYGYFNSFFNGESYSTGCLTSSHGNTKKIENGTCSGIGCCQVDIPPGMRNITVRARVFSNSTLDWGNCTYSFVVKNGAYNFSTTDLQSFRSKRLPLVLEWTVGNKSCDDSKSRRDYACKENSYCDDKDSDLGYRCRCKDGYEGNPYLGCADIDECKTDNHTCISKQNCFNTDGNHTCFCPKGHSGNGTKGVGCHQRDMVTKVIVGVGAAIVILFVSMASFYLIYQKRKLVKLREKYFQRNGGSILLQQLSTRENSSQITQIFTEEELQKATNNFDESLIIGSGGFGTVFKGFLADNKIVAVKKSKIVDESQKEQFINEVIVLSHINHRNVVKLLGCCLEREVPLLVYEFVNHGTLSDFIHTERKVNSEIWNIRLRIAAEAAGALSYLHSAASIAIIHRDVKTANILLDETYTAKVSDFGASRLVPLDQTEIATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLIELLTGEKPYSFGKIEEKRSLTNHFLSCLKEDRVFDVVQVGMVNEENKKEIMEVAILAARCLRLNGEERPSMKEVEMELEGIRKMEKHPWNNTDQNLEETQYLLHEASSSIYEHGDSNNHQYAGYDSIRDHVLIALDDGR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1478 737 Pfam Calcium-binding EGF domain 283 325 IPR001881 GO:0005509
Aed3g1478 737 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 26 707 - -
Aed3g1478 737 ProSitePatterns EGF-like domain signature 2. 267 281 IPR000742 -
Aed3g1478 737 Pfam Wall-associated receptor kinase galacturonan-binding 36 90 IPR025287 GO:0030247
Aed3g1478 737 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 707 IPR045274 GO:0007166
Aed3g1478 737 SMART egfca_6 283 326 IPR001881 GO:0005509
Aed3g1478 737 SUPERFAMILY Protein kinase-like (PK-like) 385 676 IPR011009 -
Aed3g1478 737 Gene3D Laminin 237 325 - -
Aed3g1478 737 CDD STKc_IRAK 412 679 - -
Aed3g1478 737 Gene3D Transferase(Phosphotransferase) domain 1 482 704 - -
Aed3g1478 737 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Aed3g1478 737 Pfam Wall-associated kinase 164 270 IPR013695 GO:0004674|GO:0016021
Aed3g1478 737 ProSiteProfiles EGF-like domain profile. 283 326 IPR000742 -
Aed3g1478 737 SMART serkin_6 406 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1478 737 SMART egf_5 238 282 IPR000742 -
Aed3g1478 737 SMART egf_5 286 326 IPR000742 -
Aed3g1478 737 ProSiteProfiles Protein kinase domain profile. 406 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1478 737 Pfam Protein kinase domain 410 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1478 737 SUPERFAMILY EGF/Laminin 283 318 - -
Aed3g1478 737 Gene3D Phosphorylase Kinase; domain 1 373 481 - -
Aed3g1478 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1478 Aed-Chr3 18914702 18917574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1478 9 737 Receptor kinase-like Gene Family AT1G21230 43.958 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aed3g1478 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1478 - - gmx:106795446 1249.96