Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1460 ATGCAGCTAGGTGACTTTGGCCTTGCCAAATGGAAGACTAGTGGGAATACTCTACACACAAGGATAATGGGAACATTAGGATACCTTGCCCCTGAGTATGTTGAAGATGGTATTGTTTCAGTGCGAGCTGAGGCAAAGATTGAGAAGTTGGCATATGATGAACTTATAGATTCTCGTCTAGGGGATTCATATGACTCAAATGAGGTATATACCATGGCCAAGGTAGCATACTATTGTGTGCAAAGAGATCATGAGAAACGCCCTTCTATTGGAGAGGTACGTAATAATTGGACAACATATATATAA 306 0.4085 MQLGDFGLAKWKTSGNTLHTRIMGTLGYLAPEYVEDGIVSVRAEAKIEKLAYDELIDSRLGDSYDSNEVYTMAKVAYYCVQRDHEKRPSIGEVRNNWTTYI 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1460 101 PANTHER OS01G0253100 PROTEIN 43 94 IPR045271 GO:0004714|GO:0006468
Aed3g1460 101 PANTHER OS01G0253100 PROTEIN 3 43 IPR045271 GO:0004714|GO:0006468
Aed3g1460 101 PANTHER RECEPTOR-LIKE KINASE 43 94 - -
Aed3g1460 101 PANTHER RECEPTOR-LIKE KINASE 3 43 - -
Aed3g1460 101 Gene3D Transferase(Phosphotransferase) domain 1 43 100 - -
Aed3g1460 101 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
Aed3g1460 101 SUPERFAMILY Protein kinase-like (PK-like) 3 95 IPR011009 -
Aed3g1460 101 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1460 Aed-Chr3 18544651 18545692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1460 2 93 Trihelix Transcription Factor Family AT1G70460 32.061 2.12e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1460 - - aprc:113874259 140.584