Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1459 ATGAGTGTTGAAATTCCTCTGCCGTCTTACGTTGTAGTTGCATGTGATGCCACGAGAGATCGCAATGAGCATGAGATCAAGCTTGTGGTTGATCATCTTCGAAGAAGGGGTGACATTCTCTCTGAATGTGATGGCTTGCTTGTGTTCTGTGCCTTGCACAAGGTTGCTCACCCAATGGGGTACCAGACATTAGCATGCCCGGAGTCCTTTTCTGGCACCAATATTCGTGCAATGCAGGAAGAAGTTAACAGAAAAGTTGCAGCATATAAAAATGTGCTTCTACCCAGTTATGTAGAACGGGAAAATAAAGGGGTTAGAATCGAGGTTAAAGTCACTGCAGGTTTTCCAATAAGACAGGTTATTTTACAAGAGGTTACAAACTATAATGCATCTTGGGTTATCCTTGATAGGTATCTTAAGCGTGACCTGAGATTCTACAAGAACAAGATATCATGTAAAATTGCGTTGGTTAAAGATGACTTGTCTGTGGAAATTTGGAGATCACAGCACACAAATGAAACCGATGTAACATCAGAACAAAAGCTTATCTATTCTTTGTCCAAGTTTGCTTCACTATCATCAGATTCTCATGATAGTGTTGGAGAGGATGAGGAGCAACCTGTTATCTTTTGCAAAAGCTATTCTCCTTCCATTGCTTCTGACAGATCTAATATGTCTAAGAGGGGTATGAAACATTCCATTGTTTCAATAGATTTTGGATCTTCTTCAGGTGAAGGTGGATACGGTCACGTATACAAGGGCATGCTTAAAGATCATGTGCAAAAAATAGCTGCTAAAGTAAGGAAAGAAGAAAGTAGACAAGGCTTTTCTGAATTCAATTCCGAGGTTTATGTGCTGAATTTTGCTAGGCACAAGAATATTGTGATGCTTTTGGGTTACTGTTTCAAGGAAAACCTCAACATTTTGGTGTATGAGTATATTTGCAACAATGGCACCAAAGATATGCCATTGCCATTGGAACTGCAAAAGGATTGCGTTTTCTACATGAGGAATGTCGTGGAGGACCCATCATTCATCGTGACATGA 1047 0.4011 MSVEIPLPSYVVVACDATRDRNEHEIKLVVDHLRRRGDILSECDGLLVFCALHKVAHPMGYQTLACPESFSGTNIRAMQEEVNRKVAAYKNVLLPSYVERENKGVRIEVKVTAGFPIRQVILQEVTNYNASWVILDRYLKRDLRFYKNKISCKIALVKDDLSVEIWRSQHTNETDVTSEQKLIYSLSKFASLSSDSHDSVGEDEEQPVIFCKSYSPSIASDRSNMSKRGMKHSIVSIDFGSSSGEGGYGHVYKGMLKDHVQKIAAKVRKEESRQGFSEFNSEVYVLNFARHKNIVMLLGYCFKENLNILVYEYICNNGTKDMPLPLELQKDCVFYMRNVVEDPSFIVT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1459 348 PANTHER RECEPTOR-LIKE KINASE 244 318 - -
Aed3g1459 348 ProSiteProfiles Protein kinase domain profile. 237 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1459 348 SUPERFAMILY Protein kinase-like (PK-like) 244 316 IPR011009 -
Aed3g1459 348 PANTHER RECEPTOR-LIKE KINASE 9 201 - -
Aed3g1459 348 PANTHER OS01G0253100 PROTEIN 9 201 IPR045271 GO:0004714|GO:0006468
Aed3g1459 348 PANTHER OS01G0253100 PROTEIN 244 318 IPR045271 GO:0004714|GO:0006468
Aed3g1459 348 Gene3D Phosphorylase Kinase; domain 1 244 314 - -
Aed3g1459 348 Pfam Protein tyrosine and serine/threonine kinase 239 317 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1459 Aed-Chr3 18539486 18544430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1459 241 321 Receptor kinase-like Gene Family AT1G79620 48.148 3.28e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aed3g1459 PK_Tyr_Ser-Thr 1.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1459 - - var:108330428 361.688