Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1447 ATGCAAATGAAGGCTATGCAGATGCAACTAACCCCGCCGGTACAAGGTTATCCCAAGAGTCTCACAACCCTGGTATTGCTGGTGATTGTGTTGGAAAGGAGGAGAACTACAGCAGCAGCTTATAACCAAACCCTAAGAGGCTGCCCAAGCACTTGTGGAAATATTTCAATTCCATATCCATTTGGCATGGGCAAATCATCATTCAACGGTGTTAACTGTTTCTTGCACAAAGAATTGGAGCTTACATGCCATGAATCCATTTTAAAACCTCCTAAACGTAACGTGCAATTTTTGAACATAACCCTAGATGGGAAAATAGACTTGCTCTTCAATATATCCCAGGTTTGCAAGACAGGATCCGATGATAATAAAAAATATGGTCCTATAGTTGAGCACAGAAGCCGATTTTTCACCATTTCCAACGAGGACAACAAGTTCGTAACCGTAGGCTGCGACAGTTACGGCCATCTGAACAGTATTCGTAACAGCACCACCCTCTCTTCGACTGGGTGCTCGACAAAGTGCAACAGCATGGAGAGTGTGCAAAGCATGCTGAGAGGTGAGAACTGCACCGGGATAGGGTGTTGCCAGATCGATATACCTGATGGAATGAATGATATGAGTATAGAAGCCTTCAGCTACAACAATTTCATTAACACTTCCCACTTCAACAACTGCAGCTCTACCTTTGTTGTCAAAAAACACACCTATACTTTCTCTGTGGATCATTTAAGCCACTTTCCTTTCAATAACACTACCATAGTCATTGATTGGAGTGTTGGAAACGACACGTGTGACAAATTTTCCAACCCTGGTAGTAGTAGTCCTCACTATGCATGCAGGAACAATAGCTATTGTGAGGACTCACCCACTCGAAATGGTTACCGATGCAAATGTAAGCCAGGCTATGAGGGAAATCCATACCTCCCGGATGGTTGCATAGACATAGATGAATGCATGACAGAAAAACATACATGCATAAGTCATAAAAACTGTCACAATACGGATGGAGATTACAAATGTTTCTGTCATAAGTGGCAATCAGGAAATGGAAGAAAGGAACAAGGCTGCAACGTACGTACCATGGTTATTATTGGGGCCGCAGCAGGATTTGTTATTCTATTCGTGGGGGCTGCCATACCATACTTAATATACCAGAAAAAAAAGCTCACCAAACTAAAAGAGAAATTCTTTCAACAGAATGGTGGTTTGATTTTGTTACAAAAACTCTCTACAACGGAAAAGTCCTCCCGTTTTATGCAAATTTTCACAAAAGAAGAGCTAAAGAAGGCCACCCACAACTTTGACGAGAACTCAATCATTGGTAAAGGAGGTTTTGGTACAGTTTTCAAAGGATTTCTCGCGGATAATAGAGTTGTAGCTATCAAGAAATCCAAAATAGTTGACGACAGCCAAAAGGAACAATTCATCAACGAGGTGATTGTTCTATCCCAAATCAATCATAGGAATGTGGTCAGACTCTTGGGATGTTGTTTAGAGACAAAAGTTCCTTTGCTGGTTTATGAATTTGTTAACAACGGTACCCTTTTTGATTTAATACATACTGAAAGAAAGGTAAATGACACAACTTGGGAAACCCGCGTAAGGATAGCAGCAGAGGCTGCTGGAGCTCTATCGTATTTGCATTCAGAAGCCTCAGAAACCATTATCCATAGAGATGTCAAGACAGCAAACATCCTCTTGGACGACTCTTACACTGCCAAAGTGTCTGATTTCGGAGCTTCAATATTGATTCCACTTGATCAAACTGCATCATCCACGTTGGTGCAAGGAACGTTTGGCTACTTAGACCCAGAGTACATGCAAACGGGCCAACTAACTGAGAAAAGTGATGTTTATAGTTTTGGAGCAGTGCTTATAGAGCTGTTAACAGGAGAGATACCTTATTCTTTTGGCCAGCCCGGAGAGAAAAAAAATCTTGCTAACTACTTCCTATCTAACTTGAAAGAGGATCGCCTATCCAATGTTCTTCAAGTCGGCATTTTGAATGAAGAAAATGAAAAGGAGATTAAGAAGGTTGCTATTCTTGCTGCGAAGTGCTTGAGACTTAAAGGGGAAGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTGGAGATGCATCAGTTGATTAATACAAAGCCAAATCAAAAGGAGACCGATGGATACTTGGTTCATGAGACATCAACTAAGATTTACGAGCATGGTGATAGCAGTAGCCATCAAGAGCAATATGACAGCATTGGGGATCAAGTTATAACTGCTATGAATGATGGAAGATGA 2283 0.4135 MQMKAMQMQLTPPVQGYPKSLTTLVLLVIVLERRRTTAAAYNQTLRGCPSTCGNISIPYPFGMGKSSFNGVNCFLHKELELTCHESILKPPKRNVQFLNITLDGKIDLLFNISQVCKTGSDDNKKYGPIVEHRSRFFTISNEDNKFVTVGCDSYGHLNSIRNSTTLSSTGCSTKCNSMESVQSMLRGENCTGIGCCQIDIPDGMNDMSIEAFSYNNFINTSHFNNCSSTFVVKKHTYTFSVDHLSHFPFNNTTIVIDWSVGNDTCDKFSNPGSSSPHYACRNNSYCEDSPTRNGYRCKCKPGYEGNPYLPDGCIDIDECMTEKHTCISHKNCHNTDGDYKCFCHKWQSGNGRKEQGCNVRTMVIIGAAAGFVILFVGAAIPYLIYQKKKLTKLKEKFFQQNGGLILLQKLSTTEKSSRFMQIFTKEELKKATHNFDENSIIGKGGFGTVFKGFLADNRVVAIKKSKIVDDSQKEQFINEVIVLSQINHRNVVRLLGCCLETKVPLLVYEFVNNGTLFDLIHTERKVNDTTWETRVRIAAEAAGALSYLHSEASETIIHRDVKTANILLDDSYTAKVSDFGASILIPLDQTASSTLVQGTFGYLDPEYMQTGQLTEKSDVYSFGAVLIELLTGEIPYSFGQPGEKKNLANYFLSNLKEDRLSNVLQVGILNEENEKEIKKVAILAAKCLRLKGEERPSMKEVAMELEMHQLINTKPNQKETDGYLVHETSTKIYEHGDSSSHQEQYDSIGDQVITAMNDGR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1447 760 Pfam Calcium-binding EGF domain 315 357 IPR001881 GO:0005509
Aed3g1447 760 Gene3D Phosphorylase Kinase; domain 1 407 510 - -
Aed3g1447 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
Aed3g1447 760 ProSiteProfiles EGF-like domain profile. 270 314 IPR000742 -
Aed3g1447 760 Pfam Wall-associated receptor kinase galacturonan-binding 48 103 IPR025287 GO:0030247
Aed3g1447 760 ProSitePatterns Calcium-binding EGF-like domain signature. 315 341 IPR018097 GO:0005509
Aed3g1447 760 Gene3D Laminin 263 318 - -
Aed3g1447 760 Gene3D Laminin 319 357 - -
Aed3g1447 760 Gene3D Transferase(Phosphotransferase) domain 1 511 730 - -
Aed3g1447 760 SMART egfca_6 265 314 IPR001881 GO:0005509
Aed3g1447 760 SMART egfca_6 315 358 IPR001881 GO:0005509
Aed3g1447 760 SMART serkin_6 435 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1447 760 ProSitePatterns Protein kinases ATP-binding region signature. 441 464 IPR017441 GO:0005524
Aed3g1447 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 30 716 - -
Aed3g1447 760 SUPERFAMILY Protein kinase-like (PK-like) 413 707 IPR011009 -
Aed3g1447 760 SUPERFAMILY EGF/Laminin 315 349 - -
Aed3g1447 760 ProSiteProfiles Protein kinase domain profile. 435 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1447 760 Pfam EGF-like domain 276 306 IPR000742 -
Aed3g1447 760 CDD STKc_IRAK 441 706 - -
Aed3g1447 760 ProSiteProfiles EGF-like domain profile. 315 358 IPR000742 -
Aed3g1447 760 Pfam Protein kinase domain 436 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1447 760 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 332 343 IPR000152 -
Aed3g1447 760 SMART egf_5 264 314 IPR000742 -
Aed3g1447 760 SMART egf_5 318 358 IPR000742 -
Aed3g1447 760 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 716 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1447 Aed-Chr3 18279901 18284770 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1447 40 760 Receptor kinase-like Gene Family AT1G21230 42.257 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aed3g1447 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1447 - - gmx:100779983 951.044