LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed3g1445	ATGGCCACAATGCTAAATTTTCAGAACTCTTCTCTTCTAACTTTATTGATGTTATTGGTGTTTCAGGCTGTGAATGTGATAGGCAAGAAGCAATACTGCACGGATAAATGTGGAGGGGTTGATATTCAATTTCCATTTTATCTCAGAAACAACAGCAAGTTCAATCACAACACTGACTATCCCGCTGGATTTGATCTGATATGCACCGAAAAAGATGAGACTTTGCTGGAGCTACCTGCTGTCCCAATAAAACTGTTTGTCAGAAACATCAATTACAAATCTCAACAAATTCAAATCTATGACCCTGAAAACTGCATTCTAAGGAAGCTCTTGAATCTCAGCAATGCATCCATTTCTCCATTCCAATTTTGGCTGCCATACCCTGATTATTACAAGACTGATGTTTCCTTCCTCCGTTGCGATTCAGTGTCTCCGTGTCCTATTTTACTGCTTGCATCCAACAACGACGTTAATCAACCAGAAATAGTATCCTGCACCCTGGTGAAAGATGTTTTATCCGTCAAATGGTATGATTCGTATAACTTATATTATAAGAGGGCAGTGGGTATGAAATGGTCGAAGCCTGACTGCAGTTACTGTGAAGCGCAAGGCCAGAAATGCAAATGGAAGAACAGTAGTACCATTGGTGAAACTGAATGTTTCGTTTGCCCAACAAACAGGATTCTCACATCAACTATTCTACTCATTGCTGCAGTTTCAACACTTATTGTCCTCCGATCAATACGAGACCCTCAAATAGTGCAGACGGACTTGCAACACAAAATGCTTTCTTATTCTACTTCCACTTGTTGTATTGCCAGTTTGAACTCATCCATGATGCATGCTTCACATAAAATTCACATTAATTAA	870	0.3954	MATMLNFQNSSLLTLLMLLVFQAVNVIGKKQYCTDKCGGVDIQFPFYLRNNSKFNHNTDYPAGFDLICTEKDETLLELPAVPIKLFVRNINYKSQQIQIYDPENCILRKLLNLSNASISPFQFWLPYPDYYKTDVSFLRCDSVSPCPILLLASNNDVNQPEIVSCTLVKDVLSVKWYDSYNLYYKRAVGMKWSKPDCSYCEAQGQKCKWKNSSTIGETECFVCPTNRILTSTILLIAAVSTLIVLRSIRDPQIVQTDLQHKMLSYSTSTCCIASLNSSMMHASHKIHIN	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed3g1445	289	PANTHER	RING-H2 FINGER PROTEIN ATL21A-RELATED	12	223	-	-
	Aed3g1445	289	Pfam	Wall-associated receptor kinase galacturonan-binding	33	101	IPR025287	GO:0030247
	Aed3g1445	289	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	12	223	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed3g1445	Aed-Chr3	18185707	18188085	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed3g1445	30	256	C3H Transcription Factor Family	AT2G46495	28.409	1.97e-16	76.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed3g1445	-		-	gmx:100816669	313.923