Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1443 ATGTTCAATTTTCAGAAATTTTCTCTGCTAATTCTATTGACGTTGCTGCTTCAGCTTGTGAATGTGTTAGGAGGCAAGAATCACTACTGCACGCAAAAATGTGGACACGTTCGTATTCAATTTCCATTTTATCTCAGAAACAACAAGTTCAATCACACCACCCATTATCCCCCTGGGTTCGATCTGCTATGTACAGAAAAAGATGAGGCTGTGCTGGAGCTACCTTCTGTTCCAATAAAATTGTTTGTCAGAAACATAGATTACCAATCTCAGCAAATTCAAATCTATGACCCTCAAAATTGCCTTCTAAGACAGCTCATGAATCTCGGCAATGCATCCATTTTTCCATTCCAATTTTCGCAGCAGAAAGTTTCTTACAAGACTAACGTTTCGTTCTTCCGTTGCGATTCAATGGTATCGTGCCCTATTTTGCTTCTTAGCTCCGTCGACGACGTTAATATCCACCCCCAGATACTATCCTGCACCAAGCTGAAAGATGTTTTATCCATCAACTGGGAATATTCATTTAATTACAAGATGGCGTTTATGGAATGGTCGAAACCTGACTGTAGTTACTGTGAAGCACAAGGGCAGAAATGTAGATGGAAGAATGGTACCAACGGTGAAACTGAATGTTTCGTTTGCCCAACAAACGAGATTCACACATCAACAATTGTACTCATTGCTGCAGGAGGAATACTTGGTTTGATGCTCTTGCTACTACTAGTCAAGGCATTGTTTCGTGTGTATGGCTATTATAGGATGAAAGGAACTGACCAGGCTCGGATAGAGAAATTCTTGGAAGATTATAGGGCAATGAAACCTACCAGATTCACTTATGCTGACATTAAGAGAATCACAAATGGATTTAGTGAAAGTTTAGGAGATGGGACTCATGGAACAGTGTTCAAAGGAATGCTCTCTCGAGAAATTCTCGTTGCTGTGAAGATACTTAACAACACAGTGGAAGATGGAAAAGATTTCATAAATGAAGTGGGAATTATTGGAAAAATTCATCATGTTAACATTGTTCGTTTGCTTGGATTTTGTGCAGAACGGTTCCACCATGCTCTTGTTTATGATTTCTTCCCAAATGGATCGCTGAAGAGATTCTTGGTTCCTCCGGACAACAAGGATGTTTTCCTTGGTTGGGAAAAGTTGCAACAAATTGCTTTGGATGTTGCCAGAGGGATTGAATATCTCCACCTTGGCTGTGATCATAGAATACTTCATTTTGACATTAATCCTCACAATGTTTTGCTAGATGACGACTTCATTCCAAAAATTACTGATTTTGGACTTGCCAAGCTGTGTCCCAAAAATCAAAACACTGTATCTATGAGTGCAACCAAGGGAACCTTGGGCTACATTGCCCCTGAAGTTTTCTCAAGGAGCTATGGTAATATATCATATAAATCTGACATTTATAGTTATGGGATGTTATTGTTGGAGATGGTTGCAGGAAGAAATAATACAAATGTTTCAGCAGAGGAAAGTTTCCAGGTTATATACCCTGAATGGATATATAATTTGCTGGAAGGCAAAGACACACAGGTTACTATTGATGATGAGGAATATGTTAAACTTGCAAAGAAACTTGCCATTGTAGGACTTTGGTGTATTCAATGGAATCCAGTGGACCGTCCATCCATGAAAATTGTGGTACAAATGCTTGAAGGGAATGGAGACGAATTAATTTCACCTGCAAATCCTTTTAAAATCATCGGATCTTCTGAAACAAATGTCATCGTTCCAACCAGACGTCATAATTTTGAGTTGGAAATTATTCATGAAATAGAAGAGTAA 1806 0.3887 MFNFQKFSLLILLTLLLQLVNVLGGKNHYCTQKCGHVRIQFPFYLRNNKFNHTTHYPPGFDLLCTEKDEAVLELPSVPIKLFVRNIDYQSQQIQIYDPQNCLLRQLMNLGNASIFPFQFSQQKVSYKTNVSFFRCDSMVSCPILLLSSVDDVNIHPQILSCTKLKDVLSINWEYSFNYKMAFMEWSKPDCSYCEAQGQKCRWKNGTNGETECFVCPTNEIHTSTIVLIAAGGILGLMLLLLLVKALFRVYGYYRMKGTDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGDGTHGTVFKGMLSREILVAVKILNNTVEDGKDFINEVGIIGKIHHVNIVRLLGFCAERFHHALVYDFFPNGSLKRFLVPPDNKDVFLGWEKLQQIALDVARGIEYLHLGCDHRILHFDINPHNVLLDDDFIPKITDFGLAKLCPKNQNTVSMSATKGTLGYIAPEVFSRSYGNISYKSDIYSYGMLLLEMVAGRNNTNVSAEESFQVIYPEWIYNLLEGKDTQVTIDDEEYVKLAKKLAIVGLWCIQWNPVDRPSMKIVVQMLEGNGDELISPANPFKIIGSSETNVIVPTRRHNFELEIIHEIEE 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1443 601 PANTHER RUST RESISTANCE KINASE LR10-RELATED 47 600 IPR045874 GO:0004672
Aed3g1443 601 Gene3D Transferase(Phosphotransferase) domain 1 363 567 - -
Aed3g1443 601 Gene3D Phosphorylase Kinase; domain 1 262 362 - -
Aed3g1443 601 Pfam Protein kinase domain 292 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1443 601 ProSiteProfiles Protein kinase domain profile. 288 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1443 601 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Aed3g1443 601 Pfam Wall-associated receptor kinase galacturonan-binding 30 97 IPR025287 GO:0030247
Aed3g1443 601 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 47 600 - -
Aed3g1443 601 SUPERFAMILY Protein kinase-like (PK-like) 270 559 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1443 Aed-Chr3 18163577 18165532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1443 159 571 Receptor kinase-like Gene Family AT1G66910 41.324 6.69e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aed3g1443 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1443 - - gmx:100816669 933.71