Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1432 ATGTCATTGGTTTTATCAACAGAGTTGGCTGATCCATCCTATAGGAATGCCAAGCTCTACACACTAAAGGGAACCGATGTAACACTCACACCTGATCTCTCATCACACAATTTCGCACCAGACAAGCACAGAAGCATGTACATGACAACAGAATCATACTCAAGTGAGAGCTACGAGAAATACTTCCTCGATTTGCCAACTGGAGAACTCGTGGAACCGTCTAGCTCGAGCATATCGGGAACTTCGGTGATCGTTAGCAACCCATTTGACTCGTCTATCTGGTCTACTCGCGACGCCTACCAGTCCAATTCGGAAGATGCCAGCCCCGACGGCCTTGACTTCGACGGCGAAATGAGATTAAAGCTTCAAGAATTAGAGAGGGCATTGTTTTCCGATGACGAGGAAGAGGAGGAAGGCATGTTTGAGACGGTCCAAAGCATGGAGATTGATCCTCCAGGGATGGACGAGTGGGTGAATCCAAGTTCCACATCAGTTAAAGTTAAAGACAAGATAGAATATATAAGTAGGAGGCGACCCTCATGTGAGTTAGCTTTTGAGGTTGAGTTAGGTCCAAACCCACATTCTAAGCTCCTTCGTGGCTCGCCAAAGGAGTCCTCATCCTCGGATTCTTCCTCTGATCTTAGCAGCATCAGCAGCACCACCACCAAAGACGCGCCTCAGACGCCTAAGCAACTGCTTTACGAGTGTGCTAGAGTGCTATCAGAAGGAAATGAAAACGAAGCAGTGTCGATGATAAACAAGCTAAGGCAAATGGTGTCGATTCAGGGCGATCCTTCCCAGAGAATCGCTGCCTACATGGTTGAAGGACTCGCTGCTCGTCTCGCCACGTCGGGAAAATGCATCTATAAAGCCTTGAGATGCAAGGAACCTCCTTCCAACGATCGTTTAGCAGCAATGCAGATTCTGTTCGAGGTCTGTCCGTGTTTCAAATTCGGATACATCGCTGCCAATGGCGCCATCGCCGAGGCCGTTAGGGACGAGAAGAAGGTCCACATCGTCGACTTCGACATCTGCCAGGGAACACAATACATAGCTCTGATACAAACACTTGCATCAATGCCGGGAAGGCCGCCTCGCGTGAGGCTAACCGCAGTGGACGATCCGGAGTCCGTCCAGCGCTCCGTCGGCGGAATAAGAGTCATTGGACAGCGGCTCGAGAAGCTGGCGGAGGAGCTCGGACTGCCGTTCGAGTTTCGAGCGGTAGCGTCGAGCACATCGATCGTCACGCCATCGATGTTAAACTGTCGTGGTTCAGAGGCAGAGGAAGTACTCGTGGTGAACTTTGCGTTCCAGCTTCATCACATGCGCGATGAGACAGTGTCGACGGTGAACGAGAGGGACCAGCTTCTGAGAATGGTGAAGAGTTTGAATCCGAAGCTCGTGACGGTTGTGGAGCAGGACATGAACACCAACACCTCCCCCTTTCTCCAGAGGTTCGTGGAGGCCTACAACTACTACTCTGCCGTGTTTGACACGCTTGATGCAACCCTTCCGAGGGAGAGCCAGGACAGGATGAATGTGGAGAGGCAATGCCTGGCGAAGGACATCGTGAACATCGTGGCGTGCGAGGGAGAGGAGCGGATCGAACGGTACGAGGTGGCCGGGAAGTGGCGCGCGAGGTTGTCAATGGCAGGGTTCAGTCCTTCTCCGATGAGCACAAATGTGAGAGAAGCGATTAGGAAACTCATTGTTAAGCAGTACTGTGAGAGGTTCAAGGTGAAGGAGGAAATGGAGGGGCTTCATTTTGGGTGGGATGACAAAACCTTAGTCGTGGCTTCAGCATGGAAGTGA 1812 0.5149 MSLVLSTELADPSYRNAKLYTLKGTDVTLTPDLSSHNFAPDKHRSMYMTTESYSSESYEKYFLDLPTGELVEPSSSSISGTSVIVSNPFDSSIWSTRDAYQSNSEDASPDGLDFDGEMRLKLQELERALFSDDEEEEEGMFETVQSMEIDPPGMDEWVNPSSTSVKVKDKIEYISRRRPSCELAFEVELGPNPHSKLLRGSPKESSSSDSSSDLSSISSTTTKDAPQTPKQLLYECARVLSEGNENEAVSMINKLRQMVSIQGDPSQRIAAYMVEGLAARLATSGKCIYKALRCKEPPSNDRLAAMQILFEVCPCFKFGYIAANGAIAEAVRDEKKVHIVDFDICQGTQYIALIQTLASMPGRPPRVRLTAVDDPESVQRSVGGIRVIGQRLEKLAEELGLPFEFRAVASSTSIVTPSMLNCRGSEAEEVLVVNFAFQLHHMRDETVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEERIERYEVAGKWRARLSMAGFSPSPMSTNVREAIRKLIVKQYCERFKVKEEMEGLHFGWDDKTLVVASAWK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1432 603 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 195 602 IPR030011 GO:0003700|GO:0005634
Aed3g1432 603 MobiDBLite consensus disorder prediction 192 226 - -
Aed3g1432 603 MobiDBLite consensus disorder prediction 199 226 - -
Aed3g1432 603 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 75 IPR030011 GO:0003700|GO:0005634
Aed3g1432 603 Pfam GRAS domain family 230 603 IPR005202 -
Aed3g1432 603 ProSiteProfiles GRAS family profile. 220 603 IPR005202 -
Aed3g1432 603 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 75 IPR005202 -
Aed3g1432 603 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 195 602 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1432 Aed-Chr3 18030752 18032563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1432 1 603 GRAS Transcription Factor Family AT1G21450 56.598 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed3g1432 GRAS 2.5e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1432 - - gmx:100807048 898.271