Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1431 ATGGGTTCCTCGGTAACCGAACCCGTAAACGAAGCTCTCCGTGGCGGCGGCGTCGAAGAAGCAGAAGAAGAGGATTATACTTCAAGCAAAAAACGCGCCAAGTTCTACGACGTTTACGGACCCGAAGGCAAAGCGGATGTTGTTTTTAACTCACCAGAAGATAATTCTACTCTCAATCTAAGCGATGTCCAAGGACTTGTAACTTGGGTGCTTGGTGAAGGATTTATGCCGTCATGGGTTTTCATTAAGCATTCTTATGATTTGCAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTTCTTGTCGCAGTCTAAAAAAATGCTTCCCAGATTAAAAAAAATCTGTGGCAAACCAAGGCCACTCCTAGCTCTTAGCTGTGTATCAGATGGTATGCAGACGATAGATGCACTCCTAACATGCAAGATGAAAAGGAAAAGGGATGAGAATAGTTCAGTTATGAGGAAATCTACCCTGACATCTCAACAAGAAGAAGGTTGTCGTGATACGAACAATCTATCGTTTAAGGAGCTTACAAAAGACATACCTTTCCCTGTTACATACTATACACTAACAGAGAAAGAGCTGGAAGAGAATGGATATTCTCTTAATAAGCCAGGTTTTCTTTCAACTTTGCCCACACCTCCAGGATCTCCTTTTTATGAGATGTTGGCACTTGATTGTGAGATGTGCATAACAGGTGAAGGTTTTGAGCTGACAAGAATTACTCTAGTGGATGTCAAAGGACAGGTTTTAATAGATAAATTGGTTAAACCATCAAATGCCATCACTGATTACAACACAAGATTTAGTGGAATAACATCTGAGATGTTAGATGGTGTGACAACAAGTCTGAGAGACATTCAGGAAGAGTTCCTAAAGTTGGTTTACATGGAGACTATCCTTGTTGGGCATTCTCTGGAAAATGATTTGTTAGCATTGAAGATATCTCATGACTTGGTCATTGACACAGCAGTGTTATACAAACACCCCCGAGGATCATCTCATAAAAGTGCTCTACGGTTTCTTACTAAGAGATTTCTTTCAAGGGAGATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCATGGAATTGGCACTATTGAAGATCACAAATGGCAAGAGGATTAGCAAGTTCATTAGGGTACAGCTCTCATATCCACGAAGACCTGATTTTGGTTCCCCTCCATCCTTTACACGGAAAAAGCTCCTTTCTATCCTGAGTGAGTCTGGGAAAACTTCCTCACTGATTGATGATATATCCGTAGTAAAACGGTATGCCTCAGAGTCCTCTCATGCAATTCCAGTGACCTCTGATGATGTAGCACTTGCAAAGGCCAGCAAGGAGGTGAAGAATGAAAAGGTACATTTTATCTGGACTCAGTTTTCGGAGCTACACTCATACTTGAAGAAACAAGCTGAAGATTCTGAGAGCTTGAATAAAAGACTTGCAGAGATGATGGCATTACAAACATGTCAGAATAATAATTTTGCAAAAGGGAAAGGCTTCAACTTGAAAGCATCTGCTGAACTGAAGGAAATTCTGGCTCGCATGGATGCTAGAATTCATAATCTGTACATGTCATTACCCACTAATGCTATGATGATAATTTGCACTGGTCATGGAGACACTGCTATTGTCCGCAGGCTGAGGAAAATGCTTTCGGAGCACAATGAAAGTAATTTATGTCGTGAAAAGATTGTGGAAATTTTGGAAGAGGTTCAGGCCAGAGCTGAAGTAGCCTTGTGTTTTGTAGGTGTAAAACATTGA 1815 0.4116 MGSSVTEPVNEALRGGGVEEAEEEDYTSSKKRAKFYDVYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVFIKHSYDLQNKPLIPKVVMLYMPGLDAALFLSQSKKMLPRLKKICGKPRPLLALSCVSDGMQTIDALLTCKMKRKRDENSSVMRKSTLTSQQEEGCRDTNNLSFKELTKDIPFPVTYYTLTEKELEENGYSLNKPGFLSTLPTPPGSPFYEMLALDCEMCITGEGFELTRITLVDVKGQVLIDKLVKPSNAITDYNTRFSGITSEMLDGVTTSLRDIQEEFLKLVYMETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKSALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKITNGKRISKFIRVQLSYPRRPDFGSPPSFTRKKLLSILSESGKTSSLIDDISVVKRYASESSHAIPVTSDDVALAKASKEVKNEKVHFIWTQFSELHSYLKKQAEDSESLNKRLAEMMALQTCQNNNFAKGKGFNLKASAELKEILARMDARIHNLYMSLPTNAMMIICTGHGDTAIVRRLRKMLSEHNESNLCREKIVEILEEVQARAEVALCFVGVKH 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1431 604 Pfam Exonuclease 234 380 IPR013520 -
Aed3g1431 604 PANTHER LD29573P 20 589 - -
Aed3g1431 604 CDD REX1_like 233 382 IPR034922 -
Aed3g1431 604 Gene3D - 230 399 IPR036397 GO:0003676
Aed3g1431 604 Coils Coil 484 504 - -
Aed3g1431 604 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 20 589 - -
Aed3g1431 604 SMART exoiiiendus 231 390 IPR013520 -
Aed3g1431 604 MobiDBLite consensus disorder prediction 1 28 - -
Aed3g1431 604 SUPERFAMILY Ribonuclease H-like 232 382 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1431 Aed-Chr3 18019648 18029369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1431 233 380 C2H2 Transcription Factor Family AT2G48100 30.675 1.59e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1431 K14570 - gmx:100802793 1004.59