Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1425 ATGGTGCCTCCTGGGCCACCCACACCGATTGGTGGTGCCCAGTCTGTGCCACCATCGCTTTTGAGATCGAATTCGGGAATGTTGGGGGGTCAAGGGGGCCCTTTGCCTTCACAAACTTCGTTCCCTTCGCTGGTTGCGCAGCGAAACCAGTTTAACAACATGAACATGCTAGGGAACATGTCTAATGTGACTTCCTTACTGAACCAGTCTTTCTCGAATGGAATTCCGAATTCAGGGCTTGGTGGCCCTGGGAGCAGCCAGCGTGGCAATGGAGGCGTTGATTCTGGGGCGGAGGATAACAATATCGAATTCTGGAGGAAATTTGTTGCCGAGTATTTTGCTCCAAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGGCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAATATGAAAGTGGTACTTTGGAAGAGCTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGCCGCCATGAGGAGCTCATCCCAAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATATCAGGCATTTACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAAAATAATTGCAATTTGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATATGTGAGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCCATGGATAGCCTAGCTAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACTTCATAGTCAGGCGGCACAACAGTCTGAAGATCAATTACTGCAGCAGTCACAGCCACAACAGCCACCCCAGCATGTGGTGCCTCATACTTCAAATGGTGATCAAAACCCAGTGCAAACTGCTGCAATGCAAATTGCTTCTAGCAATGGTGTGACAAGTGTAAATAATTCCGTCAACGCAGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAATTCTATGAATTCTAGACAAAATTCAATGAACAATGCAAGTAGCCCTTACGGAGGTAGTTCTGTTCAAGATCCATCCCCAGGTTCCTCCGGTAACGTGCCACAAGCACAGCCAAATGCATCCCCTTTTCAATCACCAACACCATCCTCATCTAACAACCCACAAACATCTCTCACGGCCTTAACTTCTGCAAACCACATGAGTACAGCAAACTCACCAGCTAATATTCCCCTGCAACAACAGCAGACATCTCTTCCCACTGAAGCTGACACTAGCGATGCTCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATAAATGGCACTGGTTCTCTTGGAAACAATGACATGAAGAATGTAAACGGGATCCTACCGGGGAGTAATAATACAGGGCTCAACAGTGGCAGTGGCCTAGTGGGTAACGGTGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTTCATCTGGAATGAGCAATGGAATGAGACCTATGGGACATAATTCAATCATGAATGGAAGAGGAGGAATGGCATCTCTTGCTCGCGATCAAGTTATGAACCATCAACAGGATTTGTCAAGTCAAATTCTTAGTGGGCTAAATGGCTTTAATAATAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 1968 0.4472 MVPPGPPTPIGGAQSVPPSLLRSNSGMLGGQGGPLPSQTSFPSLVAQRNQFNNMNMLGNMSNVTSLLNQSFSNGIPNSGLGGPGSSQRGNGGVDSGAEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNLSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSGSSGLHSQAAQQSEDQLLQQSQPQQPPQHVVPHTSNGDQNPVQTAAMQIASSNGVTSVNNSVNAASASTTTSTIVGLLHQNSMNSRQNSMNNASSPYGGSSVQDPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSLTALTSANHMSTANSPANIPLQQQQTSLPTEADTSDAQSSVQKIIHEMMMSSQINGTGSLGNNDMKNVNGILPGSNNTGLNSGSGLVGNGAVNSNSGVGVGGYGTMGLGSSGMSNGMRPMGHNSIMNGRGGMASLARDQVMNHQQDLSSQILSGLNGFNNNNLQFDWKPSP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1425 655 MobiDBLite consensus disorder prediction 343 387 - -
Aed3g1425 655 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 99 - -
Aed3g1425 655 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 97 654 - -
Aed3g1425 655 MobiDBLite consensus disorder prediction 74 95 - -
Aed3g1425 655 MobiDBLite consensus disorder prediction 1 41 - -
Aed3g1425 655 MobiDBLite consensus disorder prediction 17 41 - -
Aed3g1425 655 PANTHER LIM DOMAIN-BINDING PROTEIN 1 99 IPR029005 -
Aed3g1425 655 PANTHER LIM DOMAIN-BINDING PROTEIN 97 654 IPR029005 -
Aed3g1425 655 MobiDBLite consensus disorder prediction 329 387 - -
Aed3g1425 655 Pfam LIM-domain binding protein 97 339 IPR029005 -
Aed3g1425 655 MobiDBLite consensus disorder prediction 74 94 - -
Aed3g1425 655 MobiDBLite consensus disorder prediction 431 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1425 Aed-Chr3 17979074 17989190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1425 1 78 C2H2 Transcription Factor Family AT1G43850 60.241 3.33e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1425 - - gmx:100798031 848.195