LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed3g1398	ATGATGCTCAATTTTCAGAAATTGTCACTTCTTTTATTATTGGCGTCATTGCAGTTTCTGCTTCTGAAGCCTGTGTATGGCAAGAACCACTGCACGCATAAATGTGGACGCATTCCTATTCGGTTTCCATTTTATCTAAGAAACAGTACTACGCAGAATCACACCACCAACAACTATCCCCTTGGATTCGATCTGTTATGTACCCATAAAAACGAGATTATTCTGGAGCTGCCTTCCGTTCCAATACAATTGTTTGTCAGAAACATTGATTACAAATATCAGATAATTGAAATATATGACCCTCAAAATTGCCTTCCCAGACAGCTCTTGAAACTCGGCAACTCATCCATTTCTCCATTTCAATTCTCCCGGCTATATGATTTCTATCGTTATGATGACCGGACTAACATTTCCTTCTTCCATTGCGATTCAATGTCGTCGTCGTCGTGCCCCATTTTGGTACTTGGATCCTGGCAGGACGTTAATAGCCCCAAAATACTATCCTGCACCAAGCTTAAAGATGTTTTGTCTGTCAAGTGGTATCCTTGGGATTCACTGGACGGGAGGATGTTTATGAAATGGTCGAAACCAAACTGTAGTTACTGTGAAGCACAAGGCCAGAAATGTAAATGGAAGAATGGTACCAACGCTGAAACTGAATGTTTTATTTGCAAAACAAACAGGACTCCCACATCAACTATTGCACTCATTGTCGCAGGTATGTGGAATAGCTGGTTTGATGCTTTTGCTACTATTGGTCAAGGCATTGTTTTATGTGTATGA	783	0.4061	MMLNFQKLSLLLLLASLQFLLLKPVYGKNHCTHKCGRIPIRFPFYLRNSTTQNHTTNNYPLGFDLLCTHKNEIILELPSVPIQLFVRNIDYKYQIIEIYDPQNCLPRQLLKLGNSSISPFQFSRLYDFYRYDDRTNISFFHCDSMSSSSCPILVLGSWQDVNSPKILSCTKLKDVLSVKWYPWDSLDGRMFMKWSKPNCSYCEAQGQKCKWKNGTNAETECFICKTNRTPTSTIALIVAGMWNSWFDAFATIGQGIVLCV	260

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed3g1398	260	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	14	236	-	-
	Aed3g1398	260	Pfam	Wall-associated receptor kinase galacturonan-binding	31	100	IPR025287	GO:0030247

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed3g1398	Aed-Chr3	17501575	17503833	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed3g1398	41	222	C3H Transcription Factor Family	AT2G25410	33.333	3.65e-15	72.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed3g1398	-		-	gmx:100816669	300.441