Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1376 ATGTCTTCTTCTTCTTCTCTTTCGGTTACCAAAAAATACGATGTTTTCATCAGCTTCAGAGGAGAGGATACTCGCGCCGACTTCACTAGCCATCTTCATGCAGCTCTCAGCAGAAACAGCATCCAAACCTACATAGACTACAGGATCCAGAAAGGACGTGAGGTTTGGGAACAACTCGAGAAAGCAATGAAAGAGTCGATTCTCTTTTTGGTTATCTTCTCAGAGAACTACGCGTCTTCTAGCTGGTGCTTGAATGAACTCCTCCAGCTAATGGAATGCAACAAACAAGAAGAAGACGTTGATGTTGTTCCTGTGTTCTACAAAATAGACCCATATCAGGTACGCCGACAGAGGGGCAGTTATCACGCGGCATTTGCGAAGCACGAGAAAGATAGGAGGGTGAATAAAGAGAAGATGCAACAGTGGAAGGATGCTCTTTATGCAGCAGCCAATTTATCTGGCTTCCATTCTCAAGCATACAGGACTGAATCTGACTTGATTGAAGACATTATCAAAGTTGTTTTGCAAAAATTAAATCAAAAGTACCCAAATGACTTCAGAGGCTCATTCGTATCTGATGAAAACTATACAAGCATTCAATCTTTACTGAAAATTGATTCAGAGGAAGTTCGTGTCATTGGAATTTGGGGCATGGGAGGTATTGGTAAAACAACTCTTGCTGAGGTTATTTTTCACAAGATTTCATATCAGTATGAAGGCACTTGCTTCTTAAAAAATGTCACAGAGGAATTAAAAAGGCATGGTCTGAATTACATATGCAACAAACTTCTTTCTAAGTTACTACAAGAAAATCTTTGTATTGACACTCCTAAGGTAATACCCGCTTTCATTACAAGAAGACTAAAGCGTAAGAAAGTTCTCATTGTACTGGATGATGTGAATACTTCAGAACTTCTTGAAAATTTGATCGGAGTGGGTCGTGAATGGCTAGGAGCTAGTAGCCGAGTCATTGTGACAACAAGAGATAAACATGTACTTGTAGGTGAAGTTGTTGACAAAATTTATGAAGTCATGAAAATGAACTTTCAAAACTCCCTTCAACTTTTCAGTTTAAATGCCTTTGGAAAAACCTTTCCTGAAAAGGGATACGAGGAGTTATCAAAAAGAGCAATGGATTATGCCAAGGGAATCCCTTTAGCTTTGAAAGTTTTGGGATCATTTCTTCGTTCTAGAAGTGACAATGAATGGCATAGTGTACTAAGTAAGTTAAAGAAAATTCCCAATGCAGAAATTCAGGCAGTGTTGAGATTGAGTTATGAAAGTTTAGATGATGATGAGAAAAACATTTTTCTAGACATAGCTTGTTTTTTTAAAGGACTAAGAAGAGATGCTGTAACAAGATTATTAAATGCCTGCGATTTTTCTGCTGATATAGGGATAAGAAGACTTTTAGACAAAGCTCTTATCATTATTACTTTAGATACTAATAGTTTAGATATGCACAATCTGATACAAGAAATGGGTTTACAAGTTGTTCGTGAAGAATCTGTTAAAAATCCTGGGCAACGCAGTAGATTGTGGGATTCTAAGGAAGCCTATGATGTATTGACAAATAATAGAGGAACTGATGCAATTGAAGGAATATGCTTAGATATGACTCAAATTTCAGATATAAATTTAAGTTCCAAGGCATTCAAAAAGATGCCCAACCTGAGATTACTTGCTTTCCAATCCCAATCTCAATCCCACAATGGAAACTCAGAGAGAATTAATTCAGTTTATCTCCCGAAGGGTCTTAAATTCTTACCTAAAAACTTAAGATACTTTGGGTGGGAGGGATGTCCATTAGAATCTCTACCTTCAACTTTATGCCCTGAGAAACTTGTCGAGCTTCGCATGCCATACAGTAGTGTGAAATTTTTTTGGCATGGTGTACAGCAAAGTTTTCCAAATTTAGAGAAAATTGACCTTCGTGGCTCCAAACACCTTGTTGAGTGTCCAAACTTTTCTCATGCACCAAATCTGAAGTATGTTAACCTGCGTGATTGTAAAAGCTTGTCTTATGTTGATCCATCAATTTTCTCCCTCCCAAAGCTCAGAACTTTAATTATGGGTGGATGCACGTCGCTTAAGAGCCTCGGCACTAGCAGCAGCACTTGTTCACCATCTCTCCGAATATTATATTTAGATGATTCAGGTTTGGATGAATTGCCCCCATCATTTTTTCTAATAAAAAATCTCGAATCATTTTCTTTTTCAATTAATCATGGTCTTGTGGATCTTCCTGAAAACTTTGCGGGTGAAATTTCACTTTCTGATTCAAGGAAACACGATGAATGTGACACTTTCTTCACCTTACATAAGCTAATACATAGCTCTGGCTTCAAGTCAGTTACACGTCTAGTATTTGACAATTGCCAAAGCTTGCATGAAATCCCAGACAACATCTCCTTGTTATCATCATTGAAAGGGTTATGCTTATTTTATTGCGCCGCCATTGTAAGCTTGCCCGAAAGCATTAAGTATCTTTCAAGACTCGTACTTCTTGAAGTTGTGGAATGCAAAAAGCTTCAACACATACCATCACTTCCAAGATCAACTCAGTTCTTATATGTCTTTGACTGCCATTCCCTTCAGACAATGTTGAGTTCAACCATTGAATCCTCGAAGAAAAGACCCAGTTGTACTTTTCTGCTCCCTAATTGTATAAAATTGGATGAACATTCATATGATAGAGTTTTGAAAGATGCCATTGTTAGGATTGAACTTGAAGCAAAACCATTAATGTCAGCAAGCGTTTCAGAAAATGAAGAAGATGCATGTTCAGAAAATGATGCCCGTGATTTTCATTACTATCAGTTAGCAAGAAATGGTAAGATTTGCTACTGTTTACCGGCTAAAAGTGACAAGGTTCGGGACTGGTTCCATTTCTCCTTTACACACGCTATGTTCACGATGGAACTTCCCTCTATTTTGTTGGGTAAGGATTTCATTTTCTACCTGGTTGTTTCTCAAGTCCAATCATGCAACATTGGAGAATATGGAAGTATTGGATGTGAATGCTACTTGGAAACTAGCCCGAATGATTGGATCCAAATACCGAGTTTCTTTGTAGTAGAAAATGTCCAGTTAAATCTCAATCCACCATTTGAATTTATGGAAGATCACGTATTTTTATGGTATGATGCACAATGTTGCAAGATGATAAAGGAAGTAATTAGAGAGTGGAAAGCTATTAATCACAAGAGCACCAATCATCATCCAAAGCTTATCTTTAAATTCTTTGCTCAATTCAAAGATAACAATCAAGCAGTGGTCATAAAAGAGTGTGGGTTTCGTTGGATTTATTCCGAAGAAGAAGAAGGAGGAGGAGGATGTAAATCCAAGAGAAGTAGGGAAACTCATGAAGAAGAAGCAAATGTTGTCCAAAATAATGTGCAAGATGAAACACTTCCACCAACAAAAAAATGTAAGCAACATGTCTTTGGAACTTCAAATTTGGAAGTAGAAGAAACAGAGGATGTGAGGCTTCTTCTTGAAGAACTCTTGCATATTGGATTTGGTGGTGGAGACCTCATGTAG 3543 0.3768 MSSSSSLSVTKKYDVFISFRGEDTRADFTSHLHAALSRNSIQTYIDYRIQKGREVWEQLEKAMKESILFLVIFSENYASSSWCLNELLQLMECNKQEEDVDVVPVFYKIDPYQVRRQRGSYHAAFAKHEKDRRVNKEKMQQWKDALYAAANLSGFHSQAYRTESDLIEDIIKVVLQKLNQKYPNDFRGSFVSDENYTSIQSLLKIDSEEVRVIGIWGMGGIGKTTLAEVIFHKISYQYEGTCFLKNVTEELKRHGLNYICNKLLSKLLQENLCIDTPKVIPAFITRRLKRKKVLIVLDDVNTSELLENLIGVGREWLGASSRVIVTTRDKHVLVGEVVDKIYEVMKMNFQNSLQLFSLNAFGKTFPEKGYEELSKRAMDYAKGIPLALKVLGSFLRSRSDNEWHSVLSKLKKIPNAEIQAVLRLSYESLDDDEKNIFLDIACFFKGLRRDAVTRLLNACDFSADIGIRRLLDKALIIITLDTNSLDMHNLIQEMGLQVVREESVKNPGQRSRLWDSKEAYDVLTNNRGTDAIEGICLDMTQISDINLSSKAFKKMPNLRLLAFQSQSQSHNGNSERINSVYLPKGLKFLPKNLRYFGWEGCPLESLPSTLCPEKLVELRMPYSSVKFFWHGVQQSFPNLEKIDLRGSKHLVECPNFSHAPNLKYVNLRDCKSLSYVDPSIFSLPKLRTLIMGGCTSLKSLGTSSSTCSPSLRILYLDDSGLDELPPSFFLIKNLESFSFSINHGLVDLPENFAGEISLSDSRKHDECDTFFTLHKLIHSSGFKSVTRLVFDNCQSLHEIPDNISLLSSLKGLCLFYCAAIVSLPESIKYLSRLVLLEVVECKKLQHIPSLPRSTQFLYVFDCHSLQTMLSSTIESSKKRPSCTFLLPNCIKLDEHSYDRVLKDAIVRIELEAKPLMSASVSENEEDACSENDARDFHYYQLARNGKICYCLPAKSDKVRDWFHFSFTHAMFTMELPSILLGKDFIFYLVVSQVQSCNIGEYGSIGCECYLETSPNDWIQIPSFFVVENVQLNLNPPFEFMEDHVFLWYDAQCCKMIKEVIREWKAINHKSTNHHPKLIFKFFAQFKDNNQAVVIKECGFRWIYSEEEEGGGGCKSKRSRETHEEEANVVQNNVQDETLPPTKKCKQHVFGTSNLEVEETEDVRLLLEELLHIGFGGGDLM 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1376 1180 Pfam TIR domain 12 184 IPR000157 GO:0007165
Aed3g1376 1180 Gene3D - 9 175 IPR035897 -
Aed3g1376 1180 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Aed3g1376 1180 SUPERFAMILY L domain-like 537 869 - -
Aed3g1376 1180 MobiDBLite consensus disorder prediction 1107 1126 - -
Aed3g1376 1180 SUPERFAMILY "Winged helix" DNA-binding domain 417 523 IPR036390 -
Aed3g1376 1180 Gene3D - 176 339 IPR027417 -
Aed3g1376 1180 PRINTS Disease resistance protein signature 634 650 - -
Aed3g1376 1180 PRINTS Disease resistance protein signature 381 395 - -
Aed3g1376 1180 PRINTS Disease resistance protein signature 212 227 - -
Aed3g1376 1180 PRINTS Disease resistance protein signature 287 301 - -
Aed3g1376 1180 SMART till_3 12 152 IPR000157 GO:0007165
Aed3g1376 1180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 440 IPR027417 -
Aed3g1376 1180 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 705 IPR044974 GO:0006952
Aed3g1376 1180 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 705 - -
Aed3g1376 1180 Pfam NB-ARC domain 199 428 IPR002182 GO:0043531
Aed3g1376 1180 Gene3D - 347 430 IPR042197 -
Aed3g1376 1180 Gene3D Ribonuclease Inhibitor 706 893 IPR032675 -
Aed3g1376 1180 Gene3D Ribonuclease Inhibitor 522 705 IPR032675 -
Aed3g1376 1180 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1376 Aed-Chr3 16651581 16661668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1376 7 853 WRKY Transcription Factor Family AT4G12020 31.513 7.54e-110 377