Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1372 ATGGGAGATTGGGATTACTATAACAACCTCATGCATGAGCTACGACAAGGAATGGAGCTGGCAAAGCAGCTCCAAATCTCTCTTTGTTCGTCTCAAGAAATTAGCCACGAGCTTCTGATTCAGAAGATCATAGCTACATTTGAAAGGGCACTTAAAATGGTTAACATGAAATTGGGGCTAGTGGGGCAACCTTCTTCTTCTTCACAAGGATTAATTGCAATGCCAATGTCACAATCACCACGAAGTCCTCGCAGTGAAAACTCTGACCCAGACAACGGACTATGGTGGCATGAGCATCGACTTCTAAGAAAGTTGATCTTAGACCCTAACTTGATGAACTCTTTTCTAAATCTCAGGAAGAGTACTATACCAACTTGGACAAAACATGTTCGAGTTAATTTGGGGATGGGAGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAGGTCATACATGGAGCCAAGTATCCAAGAGGCTACTATAGATGCGTCCAAAGAAATGTCCATGGCTGCATGGCCACAAAACAAGTCCAAAGATCTGATCAAGACCCAACAATCTTTGAAATCAATTACCGTGGAAACCACACCTGCACAATAATGTCTTCCTCTATGGTTCCACCTTCATCATCAACACCCCAAGACCAATCATCATCACTTGCTGCTTCATCATCATCACACCACTATTTCCCTTCAACTACTTCAGCTATGGTTGATCATAACAATAACTTTGCTGCAGAAAATCTTGGTTTTCCTTCTTCTAATTATGTATCCCCTGCCACTTCAGACACAACCTACTTTATGGTTTCTCCAAATTTAGCAGGTTCTGGTGTACATGAGATCAATGACATGATCTCAGCTGCTACCTCTCCAACACTTGCGAGCTTAGAGTTCCCATTTGATCAAAATTAA 924 0.4199 MGDWDYYNNLMHELRQGMELAKQLQISLCSSQEISHELLIQKIIATFERALKMVNMKLGLVGQPSSSSQGLIAMPMSQSPRSPRSENSDPDNGLWWHEHRLLRKLILDPNLMNSFLNLRKSTIPTWTKHVRVNLGMGVEGPLDDGYSWRKYGQKVIHGAKYPRGYYRCVQRNVHGCMATKQVQRSDQDPTIFEINYRGNHTCTIMSSSMVPPSSSTPQDQSSSLAASSSSHHYFPSTTSAMVDHNNNFAAENLGFPSSNYVSPATSDTTYFMVSPNLAGSGVHEINDMISAATSPTLASLEFPFDQN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1372 307 SMART WRKY_cls 142 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1372 307 MobiDBLite consensus disorder prediction 206 229 - -
Aed3g1372 307 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 297 - -
Aed3g1372 307 SUPERFAMILY WRKY DNA-binding domain 140 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1372 307 MobiDBLite consensus disorder prediction 64 90 - -
Aed3g1372 307 ProSiteProfiles WRKY domain profile. 137 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1372 307 Gene3D WRKY domain 132 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1372 307 MobiDBLite consensus disorder prediction 64 89 - -
Aed3g1372 307 Pfam WRKY DNA -binding domain 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1372 307 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 297 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1372 Aed-Chr3 16508852 16514540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1372 8 224 WRKY Transcription Factor Family AT4G23810 36.134 8.25e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g1372 WRKY 9.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1372 - - ccaj:109795434 273.863