Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1370 ATGCAATGCATTGTATTAGATCTCCCACATGTTGTTGCTGGCTTGCATGGAAGTGAAAACCTAAAATACTTTGGTGGAGACATGTTTGAGTCGATATTGCATGACTGGAATGGCGAGGAATGCATGAACATACTGAAGAAGTGCAAGGAGGCAATCATGAGGAAAGGCAAAAAAGGGAAGGTGATTATCATAGACATGGTGATGGATGATGAGAAGAGAGACAACGAATCAGTGGAAACACAACTCTTGTTTGATATGCAGATGATGGTGTTGGTCACTGGAAAAGAGAGAAACAAGAAAGAATGGGTTAAGTTGATTTCCTCAACCGGTTTTAGTGACTATAAGATAACTCCAACAATCTTTGGCTTAAGGTCTCTCATTGAGATCTATCCATAG 396 0.4015 MQCIVLDLPHVVAGLHGSENLKYFGGDMFESILHDWNGEECMNILKKCKEAIMRKGKKGKVIIIDMVMDDEKRDNESVETQLLFDMQMMVLVTGKERNKKEWVKLISSTGFSDYKITPTIFGLRSLIEIYP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1370 131 PANTHER O-METHYLTRANSFERASE 1 131 IPR016461 GO:0008168
Aed3g1370 131 Pfam O-methyltransferase domain 1 112 IPR001077 GO:0008171
Aed3g1370 131 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 128 IPR029063 -
Aed3g1370 131 Gene3D Vaccinia Virus protein VP39 1 131 IPR029063 -
Aed3g1370 131 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 131 IPR016461 GO:0008168
Aed3g1370 131 PANTHER O-METHYLTRANSFERASE 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1370 Aed-Chr3 16451815 16452889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1370 1 131 Monolignol Biosynthesis Gene Families AT1G51990 36.301 1.33e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1370 - K16040 gmx:100781008 207.994